KEGG   Sphingopyxis macrogoltabida EY-1: AN936_16130
Entry
AN936_16130       CDS       T04104                                 
Name
(GenBank) DNA polymerase
  KO
K21929  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
smag  Sphingopyxis macrogoltabida EY-1
Pathway
smag03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:smag00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    AN936_16130
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:smag03400]
    AN936_16130
Enzymes [BR:smag01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     AN936_16130
DNA repair and recombination proteins [BR:smag03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     AN936_16130
SSDB
Motif
Pfam: DUF4130 UDG
Other DBs
NCBI-ProteinID: ALH81827
UniProt: A0A0N7GSW2
Position
complement(3429452..3430879)
AA seq 475 aa
MREVVLTEPGDFAEWRRAARGLLAGGVAPDEVSWRGSAEGASLFGDAVAAAPAGRLSLPR
ALVEIAERVICYRDPEVPARLYRLVWRALHDRQLLARTTDAEVAWLRGADKAIRRDVHKM
HAFVRFRRLGEEAGRESFAAWFEPSHRILRLTAPFFQRRFYGMDWAILTPDARAIWHGEK
LSYGPGGTRDEVPDSDVVEDQWRTYYGAIFNPARVKIDAMRAEMPKKYWKNLPEAQDIAP
LLAGAEARVERMREAAVSLANPLTDKWRTRVPEELLLDDDVKTLDDVARAVDRCTRCPLY
CNATQGVAGEGPQTARIMLVGEQPGDQEDLQGRPFVGPAGLVLNEALEEAGIDRTRLFLT
NAVKHFKFEPRGKRRLHQNPTTGEIDICRWWLDKERALVQPDLIVTLGASALRGVTGKSA
SIKAMRGAVHELAGGTKLIATIHPSFLLRLPDRARAAEEREMFVADLALARKLAA
NT seq 1428 nt   +upstreamnt  +downstreamnt
gtgagggaagtggtcctgacggagccgggcgatttcgccgaatggcggcgcgcggcgcgc
gggctgctcgcaggcggcgtggcgccggacgaggtaagctggcgcggcagcgcggagggc
gcgtcgctgttcggcgatgcggttgcggcggcgcccgcgggccggctcagcctgccgcgc
gcgctggtcgagatcgccgaacgcgtcatctgttaccgtgatcccgaggtgccggcgcgg
ctttaccggcttgtctggcgcgcgctgcacgaccggcaattgctcgcgcgcacgaccgac
gccgaggtcgcctggctgcggggcgccgacaaggcgatccgccgcgacgtccacaagatg
catgccttcgtccgcttccggcggctcggcgaagaagcgggccgcgaaagctttgcggcg
tggttcgaaccgtcgcatcgcatcttgcgcctcaccgcgcctttctttcagcgccgcttt
tacgggatggactgggcgatcctgacccccgatgcgcgggcgatctggcacggcgaaaag
ctgagctatggccccggcgggacgagggacgaggtgcccgacagcgatgtcgtcgaagac
cagtggcgcacctattatggcgccatcttcaatccggcgcgggtgaagatcgatgcgatg
cgcgccgagatgccgaagaaatactggaaaaacctgcccgaagcgcaggatatcgcgccg
ctgctcgcgggcgccgaagcgcgggtggaacgcatgcgcgaggccgccgtttccttggcg
aaccccctgaccgacaaatggcggacgcgcgtgcccgaagaattgctcctcgacgacgat
gtgaagacgctggacgacgtcgcgcgcgcggtcgatcgctgcacgcgctgtccgctctat
tgcaacgcgacgcagggcgtggcgggcgaggggccacagacggcgcgcatcatgctcgtc
ggcgaacagccgggcgatcaggaggatctgcaggggcggcccttcgtggggccggcgggg
ctggtgctgaacgaggcgctggaagaagcggggatcgaccgcacgcgattgttcctgacc
aatgcggtcaagcatttcaagttcgagccgcgcggcaagcggcgcctgcaccagaacccg
acgacgggcgaaatcgatatctgtcgctggtggctcgacaaggagcgcgcgctggtacaa
cccgacctgatcgtcactttgggtgcgagcgcgctgcggggggtgacgggcaagagcgcg
agcatcaaggcgatgcgcggtgcggtgcacgaactggccgggggcacgaagctgattgca
acgatccatccctccttcctgctgcgcctgcccgaccgcgcgcgcgccgccgaggaacgc
gagatgttcgttgccgatctggcgctggcgcggaaactcgcggcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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