KEGG   Sphingopyxis macrogoltabida EY-1: AN936_21140
Entry
AN936_21140       CDS       T04104                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
smag  Sphingopyxis macrogoltabida EY-1
Brite
KEGG Orthology (KO) [BR:smag00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:smag03016]
    AN936_21140
Enzymes [BR:smag01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     AN936_21140
Transfer RNA biogenesis [BR:smag03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    AN936_21140
SSDB
Motif
Pfam: DNA_pol_A_exo1 RNase_H_2
Other DBs
NCBI-ProteinID: ALH82777
UniProt: A0A0N9V4J5
Position
4491784..4492401
AA seq 205 aa
MSVYFHEEDLPEGVLGPGAVAIDTETMGLNPLRDRLCLVQISDGTGDEHLVRFGPGSAYD
APVLKAILTDPNRLKLFHFARFDIAALQQALGVVTAPVYCTKIASKLVRTYTDRHGLKEL
VRELLGQDVSKQQQSSDWGAAELSEAQRDYAASDVRFLHAMKEVLDARLAREGRTELAQA
CFDFLPTRAALDLAGWPEVDIFAHT
NT seq 618 nt   +upstreamnt  +downstreamnt
atgagcgtctatttccacgaagaagatctgcccgaaggggtgctgggccccggcgccgtc
gccatcgataccgagaccatggggctcaacccgctgcgcgaccggctgtgcctcgtccag
atcagcgacgggacgggcgacgagcatctggtccgcttcggccccggcagcgcctatgac
gcgccggtgctgaaggcgatattgaccgatcccaaccgtctgaaactgttccattttgcc
cggttcgacatcgcggcgctgcagcaggcgctcggcgtggtgaccgcgcccgtctattgc
acaaagatcgcctcgaagctggtgcgcacctacaccgaccgccacgggctcaaggaactg
gtgcgcgaactgctcggacaggacgtgtcgaaacagcagcagtcgagcgactggggcgcc
gccgaactcagcgaggcgcagcgcgattatgcggcgagcgacgtccgcttcctgcacgcg
atgaaggaggtgctcgacgcccggctggcgcgcgagggacgcaccgagctggcgcaggcc
tgtttcgatttcctgccgacgcgcgcggcgctcgaccttgcgggctggcccgaggtcgac
attttcgcgcacacgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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