KEGG   Streptomyces malaysiensis: SMALA_4876
Entry
SMALA_4876        CDS       T05189                                 
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
smal  Streptomyces malaysiensis
Brite
KEGG Orthology (KO) [BR:smal00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:smal02048]
    SMALA_4876
Enzymes [BR:smal01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     SMALA_4876
Prokaryotic defense system [BR:smal02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   SMALA_4876
SSDB
Motif
Pfam: T1RH-like_C SWI2_SNF2 HSDR_N ResIII DEAD HSDR_N_2
Other DBs
NCBI-ProteinID: ATL85106
UniProt: A0A291SW37
Position
6054638..6057880
AA seq 1080 aa
MTDGISEEPGSEEPPIRDLSEADWELYALDLLAERGWPHIPGRELGPSHGVRKSWGDLVL
YPRLRQAIVSRYPQLPSHAVEDAIKDLLDQSTANELRENHRFHQKLTTTGAKVSYTDPLT
DEEHHVTVRPVDFSNPHGNDLVAASQVRVVSDKDRTFVFDIVLYVNGLPLALIELKKASS
TDSSRTAYDQIQNYRRELKTTAFATILATVATDGITARIGTPFTPWQHMAPWHATEDGVL
LRKEEREDGRALERMVDGPLEPDRFLDLLANFLSYSAEDTGAVDTVKMAKAHQYIAVNKA
VQATESAVATDGRAGVVWHTQGAGKSEEMLFYTAKISGSRTPELANPTVVLLTDRIDLDD
QLFKTFARSHSLHQAVGVPERAKDAPQLRELLTTRAGGVVFTTLQKFRLSEGEREAEARH
PELSPRRDIIVIVDEAHRSHYDFYDGFARHLRDALPHATFIAFTGTPIDNTTGNTRAVFG
DDIHTYDLTQAVDDGATVPVFYEPHLIPVDIPADADLDELNAQAEGLVEGLSEEERRKAQ
RRFASYESLIGDQDRVEELADGILAHWDARSSEMKKLTGKTGKGMVVCASRAIAARLFEA
LARRRPDWIGERDKRTGLLRDDTGRIKVVFTGNPSRDDPEVVDYVRTPDQLKKIQDRVVK
EKDELELIIVQSLWLTGFDAPPLHTLYLDRRMRGAALMQAIARVNRTWGEKPSGLVVDFQ
GVAHHIKQALIEYSDRDREKETIGADISEAVDMVREQHQRLTEILHGCAWRDVLNSGQQR
AYLDAVLEVLDFFQITEPHLAPGQPTRRQRFMHYSRLLAQAFTLCPTAPDVQDLLPDIQF
FEAVRTYREKLTADADEEQGLATEADVRLLIEQLNAQAVAADGIIDIYDAVGLTRPDLSH
LDDEFIARMQASRHPHLAIEALRQAMTKEIREAHPGNITRQQTFTEKMKAVMNRYTNGLL
TSAQVIEELVKVAREVSADRERARKLGLTEDELAFYDAVAANPSAVEEMGTGILAQIAKA
LVEQVRNDVTIDWKVREQARDRIRAKVKRLLRRFGYPPDRQPEAIERVLKQTEVKAEEWA
NT seq 3243 nt   +upstreamnt  +downstreamnt
atgaccgacggcatttccgaggaacctggctccgaggaaccgcctataagagacctgtcc
gaggccgattgggagctttacgcccttgacctcctcgccgagcgcggctggccgcatatc
cccggccgcgaactcggcccctcgcacggcgtgcgcaaaagctggggcgaccttgtcctc
tacccgcgcctgcgccaggccatcgtcagccgttatccccagctccccagccacgctgtc
gaggacgccatcaaggaccttctcgaccagtccaccgccaacgaactccgcgagaaccac
cgcttccatcagaagctcaccaccaccggggcgaaggtcagctacaccgaccccctcacc
gacgaagagcaccacgtcaccgtccgcccggtcgacttctccaacccccacggcaacgat
ctggtcgccgccagtcaggttcgcgtagtcagcgacaaagaccgcacgttcgtcttcgac
atcgtcctctacgtcaacggcctgcccctcgccctcatcgagctcaaaaaagcctccagc
acggacagctcccgtaccgcttacgaccagatccagaactaccgccgtgagctgaagacc
accgcctttgcgaccatcctcgccaccgtcgccaccgatggcataacggcccgcatcggc
acccccttcacgccctggcagcacatggcaccctggcacgccaccgaagacggtgtcctg
ctccgcaaggaggagcgcgaggacggccgggcgttggagcggatggtcgacgggccgctg
gagccggaccggttcctcgatctgctcgccaacttcctctcctactccgccgaggacacc
ggcgccgtggacacggtcaagatggccaaggcgcatcagtacatcgcggtcaacaaagca
gtgcaggccaccgaatccgccgtcgccaccgacggccgtgcgggcgttgtctggcatacc
caaggcgcgggcaagagcgaagaaatgctcttctacacggccaagatctcgggctcccgt
acacccgagctggccaatcccaccgtcgtgctgctcaccgaccgcatcgatctcgacgac
cagctcttcaagacgttcgcccggagccacagcctccaccaagcggtgggagtaccggag
agggccaaggacgcgccccagctgcgcgagttgctgaccacccgcgccggcggggtggtg
ttcacgacgctccagaagttccggctgagtgagggagagcgtgaggccgaggcccggcat
ccggagctctccccgcgtcgcgacatcatcgtcatcgtcgatgaggcacaccgcagccac
tacgacttctatgacgggttcgcgcgccatctgcgcgacgcgctcccgcacgcgacgttc
atcgccttcaccggcacccccatcgacaacacgaccggcaacacgcgtgccgtcttcggc
gacgacatccacacctatgacctcacccaggccgtggacgacggcgcgaccgtgcccgtc
ttctacgagccgcacctcatccccgtcgacattccggccgacgcggacctcgacgagctg
aacgctcaggcagagggactggtcgaagggctttccgaggaggagcggcgcaaggcgcag
cgccggttcgcgtcgtacgagagcctgatcggcgaccaggaccgggttgaggaactggcg
gacggcatcctggcgcactgggacgcccgcagttccgagatgaagaagctcaccggcaag
accggcaagggcatggtggtgtgcgcttcccgggccatcgccgcccgtctcttcgaggcg
ctggcccgtcgccgccccgactggatcggcgagcgcgataagaggaccggcctgctgcgc
gacgacaccggccgcatcaaggtcgtcttcaccggcaatccgtcccgggacgatcctgag
gtcgtcgattacgtccgcactccggatcagctcaagaaaattcaggatcgggtggtgaaa
gagaaggacgagctggagctgatcatcgtccagtccctgtggctgaccggcttcgacgcg
cctccactacacaccctctacctcgaccgccgaatgcgcggcgcggcgttgatgcaggcg
atcgcccgggtgaaccgtacgtggggtgagaagccgtccggactcgtggtcgactttcag
ggcgtcgctcaccacatcaaacaggctctgatcgagtactccgaccgggaccgtgagaaa
gaaaccatcggagcggacatctccgaggctgtcgacatggtgcgggagcagcaccagcgg
ctgacggagatcctgcacggctgtgcgtggcgggacgtgctgaactccgggcagcaacgg
gcctacctcgacgcggtcctggaggttctggacttcttccagatcaccgagccccacctg
gcgcccggccagcccacccgcagacagcggttcatgcactactcccggctgctggcgcag
gcattcactctctgccccacggcaccagacgtgcaggacctactgccggatatccagttc
ttcgaagccgtccgcacctaccgcgagaagctgaccgccgacgcggacgaggaacagggg
ctggcgacggaggccgatgtccggctgctgatcgaacagctcaacgcccaagcggtggct
gccgacggcattatcgacatttatgacgcggtgggtctcacgcggccggacctctcccac
ctggacgatgagttcatcgccaggatgcaggccagccgtcaccctcatctcgccatcgag
gcactacgccaggcgatgaccaaggagatccgagaggcccaccccggcaacatcacccgg
cagcagaccttcaccgagaagatgaaggcggtgatgaaccgctacaccaacggtctgctc
acctccgcccaggtcatcgaggaactggtcaaggtcgcccgggaagtctccgccgaccgc
gagcgcgccaggaagctggggctgaccgaggacgagctggcgttctacgacgcggtggcg
gcgaacccctcagccgttgaggaaatgggcacgggtatcctcgcgcagatcgccaaagcc
ctggtcgaacaggtccgcaacgacgtcaccatcgactggaaggtgcgcgagcaggcccgc
gaccgcatccgggccaaggtgaaacgtctgctgcggcgcttcggctatccgccggaccgg
cagcccgaagccatcgagcgggtgctgaagcagacggaggtcaaggccgaggagtgggcc
tga

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