KEGG   Serratia marcescens SM39: SM39_2388
Entry
SM39_2388         CDS       T03592                                 
Symbol
putA
Name
(GenBank) fused DNA-binding transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase
  KO
K13821  RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
Organism
smar  Serratia marcescens SM39
Pathway
smar00250  Alanine, aspartate and glutamate metabolism
smar00330  Arginine and proline metabolism
smar01100  Metabolic pathways
smar01110  Biosynthesis of secondary metabolites
Module
smar_M00970  Proline degradation, proline => glutamate
Brite
KEGG Orthology (KO) [BR:smar00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    SM39_2388 (putA)
   00330 Arginine and proline metabolism
    SM39_2388 (putA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:smar03000]
    SM39_2388 (putA)
Enzymes [BR:smar01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.88  L-glutamate gamma-semialdehyde dehydrogenase
     SM39_2388 (putA)
  1.5  Acting on the CH-NH group of donors
   1.5.5  With a quinone or similar compound as acceptor
    1.5.5.2  proline dehydrogenase
     SM39_2388 (putA)
Transcription factors [BR:smar03000]
 Prokaryotic type
  Ribbon-helix-helix
   Other families
    SM39_2388 (putA)
SSDB
Motif
Pfam: Aldedh Pro_dh Pro_dh-DNA_bdg PutA_1st PRODH RHH_1
Other DBs
NCBI-ProteinID: BAO34396
Position
2450528..2454499
AA seq 1323 aa
MGTTTMGVKLDEATRDRIKSAAQRIDRTPHWLIKQAIFNYLERLESGTDIPEIPALAAAG
QPEADDIMPQAQEESHQPFLDFAEQILPQSVTRAAITAAYRRPETEAVPMLLEQARLPAD
LAQATHKMAYGIAEKLRNQKSANGRAGMVQGLLQEFSLSSQEGVALMCLAEALLRIPDKP
TRDALIRDKISNGNWHSHLGRSPSLFVNAATWGLLFTGKLVSTHNEANLSRSLNRIIGKS
GEPLIRKGVDMAMRLMGEQFVTGETIAEALANARKLEDKGFRYSYDMLGEAALTEADAQA
YLVSYQQAIHAIGKASNGRGIYEGPGISIKLSALHPRYSRAQYERVMEELYPRLLSLTLQ
ARQYDIGINIDAEEADRLEISLDLLEKLCFEPQLAGWNGIGFVIQAYQKRCPFAIDAVID
MAQRSRRRLMIRLVKGAYWDSEIKRAQMDGLEGYPVYTRKVYTDVSYLACARKLLSVPNL
IYPQFATHNAHTLSAIYHLAGNNYYPGQYEFQCLHGMGEPLYEQVVGKVADGKLNRPCRI
YAPVGTHETLLAYLVRRLLENGANTSFVNRIADATLPLDELVADPVSAVEALAASEGQIG
LPHPRIPLPRELYGEKRTNSSGLDLSNEQRLASLSSALLTSASHPWRAEPIIDAELDQGV
EQPVINPAEPGDVVGYVREATESEVSRALDAAAAAGPIWFATPPTERAAILERAAELMES
QLQSLLGILVREAGKTFNNAIAEVREAVDFLHYYAGQVRDDFANDSHRPLGPVVCISPWN
FPLAIFTGQIAAALAAGNSVLAKPAEQTPLVAAQAVRILLEAGIPQGVLQLLPGQGETVG
STLVNDARVRGVMFTGSTDVAGILQRSIAGRLDPQGRPTPLIAETGGLNAMIVDSSALTE
QVVTDVVASAFDSAGQRCSALRILCIQEDVAEHTLQMLRGAMAECRMGNPERLSTDVGPV
IDADAKTGIERHIQAMRAKGRKVYQAAKGSAQDEKEWARGTFIKPTLIELDSFDELQKEI
FGPVLHVVRFQRNNLDALVDQINAAGYGLTLGIHTRIDETIARVTERAKVGNLYVNRNMV
GAVVGVQPFGGEGLSGTGPKAGGPLYLYRLLANRPDDALQRTLHRQDEERPMEATARPQL
LGALQSLEKWAVTSQQGELAALAQRYAELGQGGTVRPLPGPTGERNTYALLPRERVLCLA
DNEADALIQLAAVLAVGSSALWPEAELQRNLFRRLPNDVQARIAFSKDWQQDKVEFDAAI
YHGDADQLRTLCEQIAQRGGAIVSVQGFAHGETNILLERLLIERSLSVNTAAAGGNASLM
TIG
NT seq 3972 nt   +upstreamnt  +downstreamnt
atgggcactaccacaatgggcgtgaaactcgacgaggcaacacgcgaccggatcaagagc
gccgcgcagcgcatcgatcgcacgccgcactggctcatcaagcaggccatctttaattac
ctcgagcgtctcgagagcggtaccgatattcctgaaattccagcgctggccgctgcgggc
cagcctgaagcggacgacattatgccgcaagcgcaggaagagtcacaccagccattcctc
gatttcgccgaacaaattctgccgcagtcggtcacccgcgccgccatcaccgccgcctat
cgtcgcccggagaccgaagcggtgccgatgttgctcgaacaggcgcgattacccgccgat
cttgcacaggccactcacaaaatggcctatggcatcgccgagaagttgcgtaaccaaaaa
agtgcaaacggccgcgccggcatggtgcaaggcctgctgcaagagttctccctctcctcg
caggaaggcgtggcgctgatgtgcctggcggaagcgctgctgcgcattccggacaaaccg
acccgcgatgccctgatccgcgacaagatcagcaacggcaactggcactcgcacctgggg
cgcagcccgtcgctgttcgtcaacgccgctacctggggcctgctgttcaccggcaaactg
gtgtccacgcataacgaagccaatctgtcccgttcgctgaaccgcattatcggcaagagc
ggcgaaccgctgatccgcaaaggcgtggacatggcgatgcgcctgatgggcgaacagttc
gtgaccggcgaaaccatcgccgaagcgctggccaacgcgcgcaagctcgaagataaaggc
ttccgctactcctacgacatgctgggcgaagccgccctgaccgaggccgacgcccaggcc
tacctggtttcctaccagcaggcgatccacgccatcggcaaagcctccaacggccgcggc
atctatgaaggccccggcatctccatcaagctgtccgccctgcacccgcgctacagccgc
gcgcagtacgaacgcgtcatggaagagctctacccgcgcctgctgtcgctgaccctgcag
gcacgccagtacgatatcggcatcaacatcgacgccgaagaggccgaccgcctggagatc
tcgctcgatctgctggagaagctgtgcttcgaaccgcaactggccggctggaacggcatc
ggcttcgtgattcaggcctaccaaaaacgttgtccgttcgccatcgacgcggtgatcgac
atggcgcaacgcagccgccgtcgcctgatgatccgtctggtgaagggcgcctactgggac
agcgaaatcaaacgcgcccaaatggacggcctggaaggctacccggtctacacccgcaag
gtctataccgacgtttcctacctggcctgcgcccgcaagctgctgtcggtgccgaacctg
atctatccgcagttcgccacccacaacgcccataccctgagcgccatctatcacctggcc
ggcaacaactactaccctggccagtatgagttccagtgcctgcacggcatgggtgaaccg
ctgtacgaacaggtggtgggtaaagtggccgacggcaaactgaaccgcccttgccgcatc
tatgcgccggtcggcacccatgaaacgctgctggcttacctggtgcgccgcctgctggaa
aacggcgccaacacctcgttcgtcaaccgcatcgccgacgccaccctgccgctcgacgaa
ctggtggccgatccggtcagcgccgtggaagcgctggcggccagcgaaggccagattggc
ctgccgcacccgcgcattccgctgccgcgcgagctgtacggcgagaagcgcaccaactcc
agcggtctggatctgtccaacgaacagcgtctggcttcgctctccagcgccctgctcacc
agcgccagccatccgtggcgcgcagagcctatcatcgacgccgaattggatcagggcgtg
gaacagccggtgatcaacccggccgaaccgggcgatgtggtcggctacgtgcgtgaagcc
accgaaagcgaagtcagccgcgcgctcgacgccgccgcggccgccggcccaatctggttc
gctacgccgccgacggagcgcgccgcgatcctcgaacgcgccgccgagctgatggaaagc
cagctgcaaagcctgctgggcattctggtgcgcgaagccggtaaaaccttcaacaacgcc
atcgccgaagtgcgcgaagcggtcgacttcctgcactactacgccggccaggtgcgggac
gatttcgccaacgacagccaccgcccgctgggcccggtggtctgcatcagcccgtggaac
ttcccgctggcgatcttcaccggccaaatcgccgccgcgctggcggccggcaacagcgtg
ctggccaaaccggccgagcaaacgccgctggtggccgcgcaggcggtgcgtattctgctg
gaagccggcattccgcaaggcgtgctgcagctgctgccgggccagggtgaaaccgtcggc
tcaacgctcgtcaacgacgcccgcgtacgcggcgtgatgtttaccggctccaccgacgtc
gccggtattctgcagcgcagcatcgccggtcgtctggatccgcagggccgcccgacgccg
ctgatcgccgaaaccggtggcctgaacgccatgatcgtcgactcttccgccctgaccgag
caggtggtgaccgacgtggtggcctccgccttcgacagcgccggccagcgttgctccgcg
ctgcgtatcctgtgcattcaggaagacgtggccgagcacacgctgcaaatgctgcgcggc
gcgatggccgaatgccgcatgggtaatccggagcgcctgtccaccgacgtgggcccagtg
atcgacgccgacgccaaaaccggcatcgaacgccacatccaggcgatgcgcgccaaaggc
cgcaaggtataccaggccgccaaaggcagcgcgcaggatgagaaagagtgggcgcgtggc
accttcatcaagccgacgctgatcgaactcgacagcttcgacgaactgcaaaaagagatc
ttcggcccggtgctgcacgtggtgcgcttccagcgcaacaatctggacgcgctggtcgat
cagatcaacgccgccggttatggcctgacgctgggcattcacacccgtatcgatgaaacc
atcgcccgggtgaccgaacgcgccaaggtcggcaacctgtacgtcaaccgtaacatggtt
ggcgcggtggtcggggtgcagccgttcggcggcgaaggtctgtcgggcaccggcccgaaa
gccggcggcccgctgtacctgtaccgtctgctggccaaccgcccggacgacgcgctgcaa
cgtacgctgcaccgtcaggacgaagagcgcccgatggaagccaccgcgcggccgcagctg
ctgggcgcgctgcaatcgctggagaaatgggcggtcaccagccaacaaggcgaactggcg
gcactggcgcagcgctatgcggaactgggccagggcggcaccgtacgcccgctgccgggc
ccgaccggcgagcgcaatacctatgccctgctgccgcgtgaacgcgtgctgtgcctggcg
gataacgaagccgacgcactgatccagttggccgccgtgctggcggtcggcagcagcgcg
ctgtggccggaagcggaactgcagcgcaatctgttccgccgcctgccgaacgatgtgcag
gcgcgcatcgccttcagcaaagactggcagcaggacaaggtcgagttcgacgccgccatc
taccacggcgatgccgaccagctgcgcaccctgtgcgagcagatcgcgcagcgcggcggc
gccatcgtctcggtgcaaggcttcgcccacggtgaaaccaacatcctgttggagcgcctg
ctgatcgaacgttcgttgagcgtcaacaccgccgccgccggcggtaacgccagcctgatg
accatcggttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (15)   
   KEGG COMPOUND (15)   
Chemical reaction (10)   
   KEGG ENZYME (2)   
   KEGG REACTION (8)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (43)   

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