KEGG   Sinorhizobium medicae: Smed_0388
Entry
Smed_0388         CDS       T00555                                 
Name
(GenBank) protein of unknown function DUF558
  KO
K09761  16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
Organism
smd  Sinorhizobium medicae
Brite
KEGG Orthology (KO) [BR:smd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:smd03009]
    Smed_0388
Enzymes [BR:smd01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.193  16S rRNA (uracil1498-N3)-methyltransferase
     Smed_0388
Ribosome biogenesis [BR:smd03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    Smed_0388
SSDB
Motif
Pfam: Methyltrans_RNA PUA_4
Other DBs
NCBI-ProteinID: ABR59245
UniProt: A6U6G5
Position
complement(416148..416885)
AA seq 245 aa
MRANFRMQRLFVESPLHNGASHQATREQFNYLINVLRLGEGSSLLVFNGRDGEWRAEISM
PSRKQAVLVAVEQTRPQPAPCDLVYLFAPLKTGRLDYLVQKAVEMGAGVLQPVITQHVQG
KIGSLERIRANAIEAAEQCGVLGIPAVEEPRRLEDLLAAWPRDRRIVFCDEGNESQNPLP
ILNELAEHRLALLIGPEGGFSETERDLLRSLDFVTAIPLGPRILRADTAAVAAMAVIQAT
LGDWR
NT seq 738 nt   +upstreamnt  +downstreamnt
atgcgcgccaatttccgcatgcagcgtctcttcgtcgaaagcccactgcacaatggggcg
agccaccaggcaacgcgggagcagtttaactatctgatcaacgtgctgcgcttgggcgag
ggctcgtcacttctggtgttcaacggccgggatggcgaatggcgggcggaaatctccatg
ccgtcccgcaagcaggcggtcctcgtcgccgtcgaacagacgcgaccgcagcctgcccct
tgcgatctcgtctatctgtttgcacccctgaagacagggcggctcgattatctcgtgcag
aaggcggtggagatgggtgccggcgtcctgcaacctgtcataacgcagcatgtacagggg
aagatcggcagcctcgaacgcattcgcgccaatgccatcgaagcggccgagcagtgcggc
gtcctcggcatcccggctgtcgaggagccgcgtaggctcgaagaccttcttgcggcctgg
ccgcgcgaccggcgcatcgtgttttgtgacgagggaaacgagagtcagaatcccttgcct
atcctcaacgaattagccgagcaccggctggcacttctgatcggcccggagggcggtttt
tccgagacggagcgagatcttctgcgaagcctcgacttcgtgacggcaatccctctcggg
ccgcgcatcctgcgcgccgacacggcggccgtggcagcaatggccgtcattcaggctacg
ctcggggactggcgttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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