KEGG T00555: Smed

Sinorhizobium medicae: Smed_2789

Entry

Smed_2789 CDS T00555

Definition

xylose isomerase

Orthology

K01805

xylose isomerase [EC:5.3.1.5]

Organism

smd Sinorhizobium medicae

Pathway

smd00040	Pentose and glucuronate interconversions
smd00051	Fructose and mannose metabolism
smd01100	Metabolic pathways

Class

Metabolism; Carbohydrate metabolism; Pentose and glucuronate interconversions [PATH:smd00040]
Metabolism; Carbohydrate metabolism; Fructose and mannose metabolism [PATH:smd00051]

SSDB

Motif

Pfam:

AP_endonuc_2

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(2908274..2909584)

AA seq 436 aa
MSTGFFGDTAKIKYEGPESTNPLAFRHYNPDDVVLGKRMEDHLRFAVAYWHSFVWPGGDP
FGGQTFERPWFKDSMEAAKLKADVAFEFFQLLGAPFYCFHDADVRPEGRNFAENTRNLND
IVDYFAKKQDESGVKLLWGTANLFSNRRFMAGAATNPDPDVFAFAAATVKTCIDATQRLG
GENYVLWGGREGYETLLNTDLKRELDQLGRFLNLVVEYKHKIGFKGTILIEPKPQEPTKH
QYDYDVATVYGFLKKYGLENEVKLNIEQGHAILAGHSFEHELALANALGVFGSIDMNRND
YQSGWDTDQFPNNVPEMALAYYHVLAGGGFKTGGTNFDAKLRRQSIDPEDLLIGHIGGMD
CCARGLKAAAKMIEDKALSAPLEERYAGWNELEAQKMLQGGFSLEEIEARVLKADVNPQP
KSGRQELLENVVNRYV

NT seq 1311 nt +upstreamnt +downstreamnt
gtgagcacaggatttttcggcgataccgctaagatcaaatatgaaggtccggaaagcacc
aatccgctcgccttccgccattacaacccggacgatgtcgtcctcggcaagcgtatggaa
gaccatctgcgcttcgccgtcgcctattggcatagcttcgtctggccgggcggcgatccc
ttcggcgggcagaccttcgagcggccctggttcaaggactcgatggaggccgcgaagctg
aaggcggacgtggccttcgaattcttccaattgctgggcgcgccattctactgcttccac
gacgcggacgttcgccccgaggggcggaattttgccgagaacacgcgcaacctcaacgac
atcgtcgattatttcgcaaagaagcaggacgagtccggcgtcaagttgctgtggggcacg
gccaaccttttttcgaaccgccgcttcatggcgggggctgcgacgaacccggacccggat
gttttcgccttcgccgcggcgacggttaagacctgcatcgacgcgacgcagcggctcggc
ggcgagaattacgtgctctggggcgggcgcgagggctatgagaccctgctcaacaccgac
ctgaagcgcgagctcgatcagcttggccgctttctcaatctggtcgtcgaatacaagcac
aagatcggcttcaagggtacgatcctgatcgagccgaagccgcaggagccgaccaagcac
cagtacgactacgatgtcgcgaccgtctacggcttcctcaagaaatatggtctcgagaat
gaggttaagctcaatatcgagcagggccatgcgatcctcgccggccattccttcgagcac
gagctggcgcttgccaatgccctcggtgtcttcggttcgatcgacatgaaccgcaacgat
taccagtccggatgggataccgaccagttcccgaacaatgttccggaaatggcgctcgct
tattaccacgtccttgcgggtggcggcttcaagaccggtggaaccaatttcgacgcgaag
ctgcgccgccagtcgatcgaccccgaagacctgctgatcggccatatcggcgggatggat
tgctgcgcgcgcggcctcaaggccgcagcgaagatgattgaggacaaggcactctcggcg
ccgctcgaagagcgttatgccggctggaacgagctggaggcgcaaaagatgctccagggc
ggcttctcgctcgaggagatcgaggctcgggttctgaaggcggacgtaaatccgcagccg
aaatccgggcggcaggagctcctggaaaacgtggtcaaccgctacgtctga

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-SMD (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (19)   

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