KEGG T00555: Smed

Sinorhizobium medicae: Smed_2941

Entry

Smed_2941 CDS T00555

Gene name

sucA

Definition

2-oxoglutarate dehydrogenase E1 component

Orthology

K00164

2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]

Organism

smd Sinorhizobium medicae

Pathway

smd00020	Citrate cycle (TCA cycle)
smd00310	Lysine degradation
smd00380	Tryptophan metabolism
smd01100	Metabolic pathways
smd01110	Biosynthesis of secondary metabolites
smd01120	Microbial metabolism in diverse environments

Module

smd_M00009	Citrate cycle (TCA cycle, Krebs cycle)
smd_M00011	Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:smd00020]
Metabolism; Amino acid metabolism; Lysine degradation [PATH:smd00310]
Metabolism; Amino acid metabolism; Tryptophan metabolism [PATH:smd00380]

SSDB

Motif

Pfam:

Transket_pyr E1_dh

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(3087097..3090093)

AA seq 998 aa
MTRQEANEQFQLTSFLDGANAAYIEQLYARYEADPGSVSAEWQSFFKALAERPEDVVRAA
KGASWKKPNWPIPANGELVSALDGDWGTVEKVIEKKVKAKAEEASAATGVPLSEAEVHQS
TRDSVRAIMMIRAYRMRGHLHAKLDPLGLADPVEDYDELSPKTYGFEEKDYDRKIFIDNV
LGLEYATVREMVELLERTYCSTIGVEFMHISNPEEKGWIQERIEGPDKGVEFTPEGKKAI
LQKLIEAEGFEQFIDVKYKGTKRFGVDGGESLIPALEQIIKRGGQLGLKEIVLGMAHRGR
LNVLSQVMAKPHRAIFHEFKGGSYTPDDVEGSGDVKYHLGASSDREFDGNKVHLSLTANP
SHLEIVNPVVMGKARAKQDQMATVFEGDIIPLRERVKVMPLILHGDAAFAGQGVVAEILG
LSGLRGHRVGGTVHFIINNQIGFTTNPAFSRSSPYPSDVAKMIEAPIFHVNGDDPEAVVY
AAKVATEFRMKFHKPVVIDMFCYRRFGHNEGDEPAFTQPRMYKAIRSHKTVVQLYSDRLI
AEGLISDGEVEKMKADWRAHLEQEFEAGQSYKPNKADWLDGAWSGLRTADNQDEQRRGRT
SVPMKQLKEIGRKLSEIPDGFSAHRTIQRFMENRANMVQTGEGIDWAMAEALAFGTLVTE
GTKIRLSGQDCERGTFSQRHSVLYDQETEERYIPLANLAPTQARYEVINSMLSEEAVLGF
EYGYSLARPNALTLWEAQFGDFANGAQVVFDQFVSSGERKWLRMSGLVCLLPHGYEGQGP
EHSSARLERFLQLCAEDNMQVANVTTPANYFHILRRQVKRDFRKPLILMTPKSLLRHKRA
VSSLSEMAGESSFHRLLWDDAEVIKDGPIKLQKDSKIRRVVLCSGKVYYDLLEEREKRGI
DDIYLLRVEQLYPFPAKALINELSRFRNAEMVWCQEEPKNMGAWSFIDPYLEWVLAHIDA
KYQRVRYTGRPAAASPATGLMSKHLAQLAAFLEDALGG

NT seq 2997 nt +upstreamnt +downstreamnt
atgacaaggcaagaggccaacgagcaatttcagctcacatcctttctggacggcgccaat
gccgcctatatcgagcagctctatgcgcgctatgaagcagatcccggatccgtttcggcc
gagtggcaatccttcttcaaggcgcttgccgagcggcccgaagatgtggtgagagcggcc
aagggcgcctcctggaagaagccgaactggccgatccccgccaatggcgaactcgtttcg
gccctcgacggcgactggggcacggtcgagaaggtcatcgaaaagaaggtcaaggccaag
gcggaggaagcctccgccgcaaccggcgtcccgctcagcgaagccgaggtgcatcagtcg
acgcgcgattccgtccgcgccatcatgatgatccgcgcctatcgcatgcgcggccacctg
catgccaagctcgacccgctcggcctggccgatcccgtcgaggattacgacgaactctcc
ccgaagacctacggcttcgaagagaaggactacgaccgcaagatcttcatcgacaacgtg
ctcggcctcgaatatgcgaccgtgcgcgagatggtcgagctgctcgagcggacctattgt
tcgacgatcggcgtcgaattcatgcatatctccaacccggaagagaagggctggatacag
gaacgcatcgaaggtccggacaagggcgtcgaattcaccccagagggcaagaaggcgatc
ctgcagaagctcatcgaagcggagggcttcgagcagttcatcgacgtcaagtacaagggc
accaagcgtttcggcgttgatggcggcgaatccctgatccccgcgctcgagcagatcatc
aagcgcggcggccagctcggcctgaaggagatcgtcctgggtatggcgcatcgcggccgt
ctcaacgttctctcccaggtcatggccaagccgcaccgcgccatcttccacgagttcaag
ggcgggtcctacacgcccgacgatgtggaaggctccggcgacgtcaagtatcacctcggc
gcttcctccgaccgcgaattcgacggcaacaaggtccacctgtcgctgaccgcaaacccg
tcccatctcgaaatcgtcaatccggtcgtcatgggcaaggcgcgcgccaagcaggatcag
atggcgaccgtattcgaaggcgacatcataccgctgcgcgaacgcgtcaaggtcatgccg
ttgatcctgcacggcgacgcggcctttgccggccagggtgtggtcgccgagattctcggc
ctatcgggcctgcgcgggcatcgtgtcggcggcaccgtccacttcatcatcaacaaccag
atcggcttcaccacgaacccggccttctcccgttcctcgccctatccgtccgacgtggcg
aagatgatagaagcgcccatcttccacgtgaacggcgacgatccggaagcggtggtctat
gccgccaaggtcgcgaccgaattccggatgaagttccacaagcctgtcgtcatcgacatg
ttctgctaccggcggttcggtcacaatgagggcgacgagccggccttcacgcagccgagg
atgtacaaggccatccgctcgcacaagacggtcgtccagctctattcggaccggctgatt
gccgagggcctgatcagcgacggcgaagtcgagaagatgaaggccgactggcgcgcccat
ctcgaacaggaattcgaggccggccagtcctacaagccgaacaaggccgactggctcgac
ggtgcctggtcgggtctgcgcacggccgacaaccaggatgagcagcggcgcgggcggacc
tcggtccctatgaagcagctgaaggaaatcggccgtaagctttccgaaatcccggacggc
ttcagcgcgcatcgcaccatccagcgcttcatggagaaccgcgccaacatggtccagacc
ggcgagggcatcgactgggcgatggcggaagcgctcgccttcggtacgctcgtgacggag
ggcaccaagattcgcctttccggccaggattgcgagcgcggcaccttctcgcaacgccat
tcggttctctacgatcaggagaccgaggagcgctacattccgcttgccaacctggcaccg
acgcaggctcgatacgaggtcatcaactcgatgctctccgaagaggcagtgctcggcttc
gagtacggctattcgctcgcccgcccgaacgcgctgacactgtgggaagcccagttcggc
gacttcgccaatggcgcacaggtggttttcgaccagttcgtctcgtcgggcgagcgcaag
tggctgcgcatgtcgggtctcgtctgcctgctgccgcacggctatgaggggcagggaccg
gagcattcctccgcccgcctcgagcgcttccttcagctttgcgcggaagacaacatgcag
gtcgccaacgttacgaccccggcgaactactttcatattctgcgccggcaggtaaagcgc
gacttccgcaagccgctgatcctgatgactccgaagtcgcttctgcgtcacaagagggcg
gtctccagcctgtcggaaatggccggcgagagctcgttccatcgtctcctttgggacgat
gcagaggtcatcaaggacgggccgatcaagctgcagaaggattcgaagatccgccgcgtg
gtcctgtgctcgggcaaggtctattacgatctgctggaagagcgcgagaagcgcgggata
gacgacatctacctgctgcgcgtcgaacagctctatccgttcccggcaaaggcgctgatc
aacgaactcagccgcttccgcaatgcggagatggtctggtgccaggaagagccgaagaac
atgggcgcctggtcgttcatcgatccctatctagaatgggtacttgcccatatcgatgcc
aagtaccagcgggtgcgctataccggccgtcctgccgccgcttcgccggctaccggcctg
atgtccaagcatctggcgcagcttgccgccttcctcgaggacgcgctggggggctga

All links

Pathway (8)   
   KEGG PATHWAY (6)   
   KEGG MODULE (2)   
Chemical substance (13)   
   KEGG COMPOUND (13)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-SMD (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (36)   

Download RDF

DBGET integrated database retrieval system