KEGG   Sinorhizobium medicae: Smed_3573Help
Entry
Smed_3573         CDS       T00555                                 

Definition
formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
smd  Sinorhizobium medicae
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:smd00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Smed_3573
Enzymes [BR:smd01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Smed_3573
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Smed_3573
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
3780080..3781000
Genome map
AA seq 306 aa AA seqDB search
MPELPEVETVKRGLAPTMEGALLVRAELRRPDLRFPFPENFEDAVAGRRIVALSRRAKYL
TIELEGGDVIIAHLGMSGSFRIEFDGPGEGRIKESADPAVPGDFHRPRSKDEKHDHVVFH
LDASCGPARVIYNDPRRFGFMALARREALAEHVFLRGLGEEPTGNALDAAYLAARFSGKA
QPLKAALLDQRTIAGLGNIYVCEALWRSGLSPKRAAGTLVDKRARPKQALVQLTDAIRAV
IADAIAAGGSSLKDHIQADGSLGYFQHSFSVYDREGEACRTSGCRGTVERIVQAGRSTFY
CPHCQK
NT seq 921 nt NT seq  +upstreamnt  +downstreamnt
atgccggaattgcccgaggtggaaacggtcaagcgcggactggcgccgacgatggaggga
gcacttctcgtgcgcgccgaattgcgccgtcccgatctgcgctttccctttcccgagaat
ttcgaggacgcagtcgccggccggcgtatcgtcgcgctctcgcgccgcgccaaatatctg
acgatcgagctggagggcggcgacgtcatcatcgcccatctcggcatgtccggctcgttc
aggatcgagtttgacggtcccggggagggccgcatcaaggagagcgccgatcccgccgtc
cccggcgatttccaccgtccgcgcagcaaggacgagaaacacgaccatgtcgtcttccat
ctcgatgcctcctgcggcccggcccgggtcatctataacgatccacgccgcttcggcttc
atggctctggcgcggcgcgaagcgcttgccgagcacgtctttcttcgcggcctcggcgag
gagccgaccggcaacgctctcgatgcggcctatctcgccgcccggttctccggcaaagcg
cagccgctgaaagccgctcttctcgatcaaaggacgatcgccggcctcggcaatatatac
gtttgcgaggcattgtggcgttcgggcctttcgccgaaaagggcggcaggtacgctcgtc
gacaagcgggctcgcccgaagcaggcgctggttcagctgacggatgcgatccgcgccgtc
atcgcagatgcgatcgccgccggcggttcctcgctcaaggatcacattcaggcggatggc
agtcttggctatttccagcacagcttctccgtctatgacagagaaggcgaggcttgccgc
acgtccggctgccgcggtacggttgagcgcatcgttcaggcagggcgttcgaccttttac
tgtccgcactgccagaaatag

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