KEGG T00555: Smed

Sinorhizobium medicae: Smed_3724

Entry

Smed_3724 CDS T00555

Definition

RuBisCO-like protein

Orthology

K01601

ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]

Organism

smd Sinorhizobium medicae

Pathway

smd00630	Glyoxylate and dicarboxylate metabolism
smd00710	Carbon fixation in photosynthetic organisms
smd01100	Metabolic pathways
smd01120	Microbial metabolism in diverse environments

Class

Metabolism; Carbohydrate metabolism; Glyoxylate and dicarboxylate metabolism [PATH:smd00630]
Metabolism; Energy metabolism; Carbon fixation in photosynthetic organisms [PATH:smd00710]

SSDB

Motif

Pfam:

RuBisCO_large RuBisCO_large_N

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI_p1:

UniProt:

Position

pSMED01:complement(165777..167033)

AA seq 418 aa
MIHITYRIETPGDVEALARKIASDQSTGTFVAVPGETEELKRRAAARVVAIRHLPPADRA
SLPDEAGDATRFNRADAEIAYPLEAVGTDLSALMTIAIGGVYAIKGMTGIRVVDMKLPPE
FAAAHPGPQFGVAGSRRLTGVEGRPIIGTIVKPALGLLPDETAALVGDLLSSGVDFIKDD
EKLMSPAYSPLSARIAAIMPKIRDHEQKTGKKVMYAFGISHTDPDEMMRNHDLVVAAGGN
AAVVNINSIGMGGVAFLRKRSNLVLHAHRNGWDILTRHGGLGMEFSVWQQFWRLLGVDQF
QINGIRVKYWEPDDSFVKSFKAVSTPLFSREDCPLPVVCSGQWGGQAPETFVRTGRTTDL
LYLCGGGVVSHPGGAGAGVRAVRQAWEAAVAGIPLSDYAKEHPELAQSIEKFADGKGA

NT seq 1257 nt +upstreamnt +downstreamnt
gtgatccacataacctaccggatagagacaccaggagacgtcgaggcgctggcgagaaaa
atcgcaagcgaccaatcaacggggacgttcgttgctgtgccgggggaaacggaggagctg
aagcggcgggcagctgcacgcgtcgtggccattcgccacctcccaccggccgaccgggcg
tcgttgccggacgaggctggagacgcaacgcgtttcaaccgggccgatgcggagatcgca
tatcctcttgaagcggtgggaacggacctgtccgccctgatgaccattgcaatcggcggc
gtctatgccatcaaaggcatgaccggaatccgtgttgtcgacatgaaactcccgccggag
ttcgcggcggcgcatccgggtccgcaattcggggtcgccggcagtcgccgcctgaccggt
gtcgaaggccgccccattatcggcacgatcgtcaagccggcgctcggcctgctgccggac
gaaacggcagcgctcgtaggcgacctgctttcttccggcgtcgacttcatcaaggacgac
gagaagctgatgagcccggcctattcgccgctgagtgcgcgcatcgccgccatcatgccg
aagatacgcgaccatgagcagaagaccggcaagaaagtcatgtatgccttcggcatatcc
cataccgatcccgatgagatgatgcggaaccacgatctcgtggtcgccgctggtggcaat
gcggcggtcgtcaatatcaattcgatcggcatgggcggtgtcgccttcctgcgcaagcgc
tcgaacctcgtgctccacgcccaccgtaacggctgggacattctcacgcgccatggcggc
ctggggatggagttttcggtgtggcagcagttctggcgcctcctcggagtggatcagttc
cagatcaacggcatccgcgtcaaatactgggagccggacgacagtttcgtgaagtccttc
aaggcggtaagcacgccgctgttttccagggaggattgcccgctgccggtcgtgtgctcc
ggccaatggggaggacaggcgcccgagacctttgtacgcaccggacgtacgaccgatctg
ctctatctctgcggtggcggagtcgtaagccacccgggcggagccggtgccggcgtgcga
gccgtgcgtcaggcatgggaggcggcagtcgccgggataccgctctcggattatgctaag
gagcaccccgaactggcgcaatcgatcgagaaattcgccgacggaaagggcgcttga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI_P1-SMD (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (23)   

Download RDF

DBGET integrated database retrieval system