KEGG   Sinorhizobium medicae: Smed_4105
Entry
Smed_4105         CDS       T00555                                 
Name
(GenBank) pseudouridine synthase
  KO
K06178  23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
Organism
smd  Sinorhizobium medicae
Brite
KEGG Orthology (KO) [BR:smd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:smd03009]
    Smed_4105
Enzymes [BR:smd01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.22  23S rRNA pseudouridine2605 synthase
     Smed_4105
Ribosome biogenesis [BR:smd03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    Smed_4105
SSDB
Motif
Pfam: PseudoU_synth_2 S4
Other DBs
NCBI-ProteinID: ABR62912
UniProt: A6UGY2
Position
pSMED01:complement(567972..568754)
AA seq 260 aa
MKQHRPAAGKRVDGGRERAGKRVTLARALSKLGYCTRTQAEKLIAEGRVSVGGRRVTDLA
HWVDIEADRIAVDGTVIAAQPKVYLMLNKPRGLVTTRDDPEGRPTVFTCLETVDAPSLSP
VGRLDKASEGLLLFTNDTVLAQRLLDPQTHLGKRYHVQVRGFLGEAMAARMVEGVTEGGE
LLRAARVALLRGGDRNSWIEVELTEGRNRQIRRMLDALGFECLRLLRVAIGEVRLGDLPK
GASRPLAEAEIRYLRRRTGL
NT seq 783 nt   +upstreamnt  +downstreamnt
gtgaagcaacaccgcccagcggcaggaaagcgggtggatggcgggagagaacgagcggga
aagcgcgtgacgctcgcccgcgcgctctcgaagctcggctattgcactcggacccaggcc
gagaagctgattgccgagggacgtgtcagcgtcggcggcaggagagttaccgatctggct
cactgggtcgatatcgaagcggacaggattgccgtggacggcaccgtcatcgccgcgcag
ccgaaggtctatctgatgctgaacaagccgcgggggctcgtaaccacccgcgacgatccg
gagggtcggccgaccgtcttcacctgtctcgaaaccgtcgacgccccgtctctctcacca
gtcggcaggctggacaaagcgagcgaggggctcctcctcttcaccaacgacacggtgctg
gcgcagcgcctgctcgacccgcaaacccatctcggcaaacggtaccacgttcaggtgcgt
ggcttcctcggcgaggccatggcggcgcggatggtcgagggcgtaacggagggcggcgaa
ctgctgagagccgcgcgggtcgcgctcctgcggggcggcgacaggaacagctggatcgag
gtggagctcacggaggggcgcaaccgccagatccgccgcatgctcgacgcacttggcttc
gaatgcctgcgcctgctgcgcgtcgcgatcggcgaggtaaggctcggcgacctgccgaaa
ggggcaagccggccgctggcggaagcggagattcgctatctcaggcgccgaaccggcctt
tag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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