KEGG   Sinorhizobium medicae: Smed_4133Help
Entry
Smed_4133         CDS       T00555                                 

Definition
(RefSeq) glycoside hydrolase family protein
  KO
K01190  beta-galactosidase [EC:3.2.1.23]
Organism
smd  Sinorhizobium medicae
Pathway
smd00052  Galactose metabolism
smd00511  Other glycan degradation
smd00600  Sphingolipid metabolism
smd01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:smd00001]
 Metabolism
  Carbohydrate metabolism
   00052 Galactose metabolism
    Smed_4133
  Lipid metabolism
   00600 Sphingolipid metabolism
    Smed_4133
  Glycan biosynthesis and metabolism
   00511 Other glycan degradation
    Smed_4133
Enzymes [BR:smd01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.23  beta-galactosidase
     Smed_4133
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Glyco_hydro_2_C Glyco_hydro_2_N Glyco_hydro_2
Motif
Other DBs
NCBI-GeneID: 5319275
NCBI-ProteinID: YP_001312871
JGI_p1: Smed4133
UniProt: A6UH08
Position
pSMED01:complement(601177..603441)
Genome map
AA seq 754 aa AA seqDB search
MRSVTSFNDSWVFSAGFTAADAGTLQAGQPIRLPHNAIELPFNYFDETCYQRAFTYQKVL
AWRPDFSGREVSLVFDAAMADAVVYLNGEEIVAHKDGYTPIEARLTGRLREGDNLITVKI
DGSENPEIPPFGGRIDYLTFAGIYRDVWLKITDPVSIANIKIETRDVLSDARTVSVRCDL
ANPQGLSFTGAVSALLKDAAGDVLAEVAGETAGGGVTVQMDGLKGLSLWDIDDPVLYEVE
VELRTGRGSDRVAAHFGFRTAEFTNEGFRLNGRLLKIRGLNRHQSFPYVGYAMGRTAQER
DAEIMKHTLHCNLVRTSHYPQSKWFLDHCDRIGLLVFEEIPGWQHIGGEAWKEEAILNVA
RMIERDWNHPSIVIWGVRINESQDSHDFYAKTNRLARELDPTRQTGGVRYITDSEFLEDV
YTMNDFILGNEELPGSNRPRTALRPQQECTGLSRKVPYLITEFGGHMYPTKIYDQEQRQA
EHVRRHLEVLNAAYGDPSISGAIGWCMFDYNTHKDFGSGDRICYHGVMDMFREPKFAAYV
YASQCDPSEEVVMKPVTFWARGERNIGGVLPLIVLTNCDEVELKYGSLVKRIGPDRENYP
HLPHPPVVIDHRHFTKDELGVWGMKWESAEFTGFIDGKPVAGRRMVADPVPTTLEIEADG
KTLRAGGRDSIRIMLRALDQAGNVLPFLNDAVAIEVHGPARVVGPTRLVFQGGSTGFWLE
STGAAGAIVVTAVSSRLGGVKLELVAMAEGEWNA
NT seq 2265 nt NT seq  +upstreamnt  +downstreamnt
atgcgctctgttacttccttcaacgattcgtgggtcttctccgcgggcttcactgcggcg
gacgccggtacgctccaggcggggcagccgatcagacttccgcacaacgccatcgaactg
ccgttcaactattttgacgagacatgctaccagcgcgccttcacctatcaaaaggtcctc
gcctggcggcccgacttctccggccgcgaagtctcgctcgtcttcgacgcggcgatggcc
gatgcggtcgtgtatcttaacggcgaagagatcgtcgcgcacaaggacggctatacgccg
atcgaggcgcgcctgaccggcaggcttcgggagggcgacaatctcatcaccgtaaagatc
gacggtagtgagaacccggagataccgccgttcggcggccggatcgattatctcaccttt
gcaggtatctatcgcgacgtctggctcaagatcacggatcccgtttcgatcgccaatatc
aagatcgagacccgcgacgtgctctccgatgccaggaccgtctccgtccgttgcgaccta
gccaatccgcaaggcctttccttcaccggggccgtatcggcactcctcaaggatgccgcc
ggcgatgtgctggcagaggtggctggcgagacggctggtggtggcgtcaccgtccagatg
gacggcctcaaaggcctctccctctgggacatcgacgatccggtgctctatgaggtcgaa
gtcgaactcaggaccggccgagggtccgaccgcgtcgccgcgcatttcggtttccgcacc
gcggagttcacgaacgaaggctttcggctcaacggccgtctgctgaagatccgcggcctc
aaccgtcatcagtccttcccctatgtcggctacgcaatggggcgcaccgcccaggagcgc
gacgcggaaatcatgaagcacacccttcattgcaacctcgtccgcacgtcgcactacccg
cagtcgaagtggttcctcgaccattgcgaccgaattggcctgctcgtcttcgaggaaatt
ccaggctggcagcatataggcggcgaggcctggaaagaggaggcgatcctgaacgtggcc
cgcatgatcgagcgtgactggaaccatccctcgatcgtcatctggggcgtgcgcatcaac
gagtcacaggattcccacgacttctacgcgaagaccaaccggcttgcgcgcgagctcgat
ccgacgcggcagaccggcggcgttcgttacatcaccgacagcgagtttctggaagatgtc
tacacgatgaacgacttcatcctcggcaacgaggaactgccgggctcgaaccgcccgcgc
acggcgctccgcccgcagcaggaatgcaccgggctttcccgtaaggtgccctatctcatc
accgagttcggcggccatatgtatccgacgaagatctacgatcaggagcagcggcaggcc
gaacacgtgcgacggcatctggaggtgctgaacgccgcctatggcgatccgagcatttcc
ggcgcgatcggctggtgcatgttcgactacaacactcataaggatttcggctccggcgac
cgcatctgctatcacggcgtcatggacatgttccgtgaaccgaaattcgcagcctatgtc
tatgccagccaatgcgatccgtccgaagaagtggtgatgaagcccgtcactttctgggcg
cgcggcgagcgcaatataggtggcgtcctccccctgatcgtgctgacgaattgcgatgag
gtggaactgaaatacggttcgctcgtaaagcgtatcggcccggaccgggaaaactatcct
catttgccgcacccgcccgtcgtgatcgatcaccgtcacttcaccaaggacgagctcggc
gtctggggcatgaagtgggaaagcgctgaatttaccggcttcatcgacggcaagccggtc
gccggtcgccgcatggtcgccgaccccgttccgacgacactcgagatcgaggcggacgga
aagacgcttcgcgccggaggccgcgacagcatccgcatcatgctgcgcgcgctcgaccag
gccggcaacgtcctgcccttcctgaacgatgccgtggctatcgaggtgcatggtccggcg
cgggtcgtcggtcctacgcgcctcgtcttccaaggcggctccaccggcttctggctggag
tcgacgggagccgccggcgccatcgtcgttaccgcggtttcgtcgcgtctcggcggggtg
aagctcgagctcgtcgccatggcggaaggagagtggaacgcatga

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