KEGG S.meliloti: SMa0892

Sinorhizobium meliloti: SMa0892

Entry

SMa0892 CDS S.meliloti

Gene name dnaE3

Definition DnaE3 DNA polymerase III alpha chain (EC:2.7.7.6)

Orthology K02337 DNA polymerase III subunit alpha [EC:2.7.7.7]

Pathway sme00230 Purine metabolism
sme00240 Pyrimidine metabolism
sme01100 Metabolic pathways
sme03030 DNA replication
sme03430 Mismatch repair
sme03440 Homologous recombination

Class Metabolism; Nucleotide Metabolism; Purine metabolism [PATH:sme00230]
Metabolism; Nucleotide Metabolism; Pyrimidine metabolism
[PATH:sme00240]
Genetic Information Processing; Replication and Repair; DNA
replication [PATH:sme03030]
Genetic Information Processing; Replication and Repair; Mismatch
repair [PATH:sme03430]
Genetic Information Processing; Replication and Repair; Homologous
recombination [PATH:sme03440]
Genetic Information Processing; Replication and Repair; DNA repair
and recombination proteins

SSDB

Motif Pfam: DNA_pol3_alpha PHP tRNA_anti
PROSITE: AA_TRANSFER_CLASS_2

Other DBs NCBI-GI: 16262942
NCBI-GeneID: 1235525
RhizoBase: SMa0892
UniProt: Q92ZJ6

Position pSymA:497392..500655

AA seq 1087 aa
MRYAELQVTTHFSFLRAASSAEELFATARLMGIEALGVVDRNSLAGIVRALEASRATGLR
LVVGCRLDLQDGMSILVYPTDRAAYSRLTRLLTLGKGRGGKANCIIHFDDVALYAEGLIG
ILVPDLADEVCAVQLRKIAEVFGDRAYVSLCLRRRPNDQLQLHELTNLAVKHRVKTIVTN
DVLFHEHGRRQLQDVVTCIRTGMTIDDVGFERERHADRYLKPPEEMARLFPAYPEALART
MEIVERCRFSLEELVYQYPEEALILGMTAQQSLQHYTWEGVRARYPEGLPTHVEKTIRHE
LALIETMKYAPYFLTVFSIVRYARSQGILCQGRGSAANSAVCYVLGITSIDPETNDLLFE
RFVSQERDEPPDIDVDFEHERREEVIQWIYKTYGHDKAALCSTVTRYRAKGAIRDVGKAL
DLPEDLIRTLSSGIWSWSETVGERQVRELGLNPDDRRLTLTLRLAQQLMGAPRNLSQHPG
GFVLTHDRLDDLVPIEPATMADRQVIEWDKDDIEALKFLKVDVLALGMLTCMAKAFALIS
EHKHEDIDLATIPQEDPATYAMIRKADTLGTFQIESRAQMSMLPRMKPRTFYDLVIQVAI
VRPGPIQGDMVHPYLRRREGKEKVEYPTPELEAVLHKTLGVPLFQESAMRVAMVCAGFTG
GEADQLRKSMATFKFTGGVSRFKDKLVNGMIRNGYTKEFAEKTFSQLEGFGSYGFPESHA
ASFALIAYASNYIKCYFPDVFCAALLNSQPMGFYAPAQIVRDAREHGVEVRPICINRSRW
DCMLEPIDGSGGHAVRLGMRLVRGLATADAARIVAARADEPFTSVDDMWRRSGVPVASLV
ELAEADAFLPSLSLERRDALWAIKALRDEPLPLFTAAADREARAIAEQEEPEVELRQMTD
GQNVVEDYSHTGLTLREHPLRFMRDDLAKRRIVTCAQAMTAHDGQWLMAAGLVLVRQRPG
SAKGVMFITIEDETGIANIVVWPKLFERSRRVVLGASMMAINGRIQREGEVVHLVAQQLF
DLSADLSSLAERDGAFRPPTGRGDEFAHGSPGSADSRGKAPPGVRARDILVPDLHIDTLK
IKSRNFQ

NT seq 3264 nt +upstreamnt +downstreamnt
atgcgctacgccgagctccaggtcaccacgcatttctcgttcctgagggccgcaagttcg
gctgaggaactgtttgccaccgcaaggctgatgggtatcgaagcgctcggcgtcgtcgac
cgcaacagcctggctggcatcgtccgggcgctggaggcgtcgcgcgccacgggcctgcgg
ttggtcgtcggctgccggctcgatctgcaggacggcatgtcgatcctcgtttatccgacc
gatcgcgctgcctattcgcggctgacgcggctgctgaccttgggcaagggccggggcggg
aaggcaaactgcatcatccatttcgacgatgtggcgctctacgccgagggcctgatcggc
atcctggtgccggacttggccgacgaggtctgcgccgtgcagctcaggaagatagcggag
gtcttcggcgaccgcgcctatgtctctctttgtcttcgtcgtcggcccaacgatcagctg
caactgcacgagctaacgaatctggcggtcaaacaccgggtaaagacgatcgtcaccaat
gatgtgctgtttcatgagcacggccgccggcagctgcaggatgtcgtcacctgcatccgc
accggcatgaccatcgacgatgtcggctttgagcgcgagcggcacgccgatcgttacttg
aagccgccggaagaaatggcccgtctctttccggcttatccggaagcgctggcgcgaacc
atggagatcgtcgagcgctgcaggttctccttggaagagctcgtctatcaatatcccgag
gaagcgctgatcctaggcatgacggcacaacagtcgctgcagcactacacctgggagggg
gtcagggcgcgctaccccgagggattgccgactcatgtcgagaagaccatccgccatgag
ctggcgctgatagagacgatgaaatatgcgccttacttcctgaccgtcttctcgatcgtc
cgctatgcccggtcgcagggcattttatgccagggcaggggatcggccgccaattccgcc
gtttgctacgtgctcggcatcacctcgatcgatcccgagaccaacgatctcctgttcgag
cgcttcgtctcccaagagcgcgacgagccgcccgacatcgatgtcgacttcgagcacgag
cggcgcgaggaggtgatccagtggatctacaagacctatggccacgacaaggcggctctc
tgctcgaccgtcacccgctatcgggccaaaggcgccattcgcgatgtcggcaaggccctt
gatctgccggaggacctgatcaggacgctctcctccggcatctggtcctggtcggagacc
gtcggcgaacggcaggtgcgtgaactcggcctcaatccggacgatcggcgtctcactttg
actctaagacttgcacagcagctgatgggtgcgccgcgcaatctcagtcagcatcccggc
ggcttcgtgctcacccatgacaggctcgatgatctggtgccgatcgagccggcgaccatg
gccgaccggcaggtgatcgaatgggacaaggacgacatcgaggcgctgaaattcctgaag
gtcgacgtcttggcgctcggcatgctgacctgcatggccaaggcattcgcgctgatcagc
gagcacaagcatgaggatatcgatcttgccaccatcccgcaggaggatccggcgacttat
gcgatgattcgaaaggccgacaccctaggcacattccaaatcgaaagccgggcgcagatg
tctatgctgccacgcatgaagccgagaaccttctacgacctcgtcatccaagtggcgatc
gtccgccccgggcccatccagggcgacatggtccatccctatctccgccggcgcgaaggc
aaggagaaggtcgagtacccgacgcccgaattggaggcggtcctccacaagacactcggc
gtgccactgtttcaggagtcggcgatgagggtggccatggtctgtgcggggtttaccggc
ggcgaagccgaccagctccggaaatccatggcgaccttcaagttcacaggtggtgtttcg
cgattcaaggacaagctagtgaacgggatgatccgaaacggctatacaaaggagtttgcg
gaaaagacattctcacagctcgaaggctttggctcctatggcttccccgagagccatgct
gcctctttcgcactgatcgcctacgcctccaactacatcaaatgctattttccggatgtc
ttctgcgcggcgctgttgaactcgcagcccatggggttctatgcccccgcccagatcgtc
cgggatgcccgcgagcatggtgtcgaagtccggccgatctgcatcaaccggtcacgctgg
gactgcatgcttgagccaatcgacggctccggggggcatgcggtccggctcggcatgcgc
ttggtgcgcggtctggcgaccgccgacgccgcgcggatcgtagccgcccgcgccgacgaa
cccttcacctcggttgacgacatgtggcggcgatcgggcgtgccggtcgcctcgctggtc
gagctggctgaggccgacgccttcctgccgtctctcagtctcgagcgacgggatgccctc
tgggcaatcaaggcattgcgcgacgagccgcttccgctcttcaccgccgccgccgatcgc
gaggctcgggcaattgccgaacaggaggagccggaagtcgagctaagacagatgaccgac
ggtcagaacgtcgtagaggactacagtcataccggcctgacgctccgggagcatcccttg
cgtttcatgcgggacgacctcgccaagcgccggatcgtcacctgtgcccaggcgatgacg
gcgcacgacgggcaatggctgatggccgccggcctggtgctggtgcgtcagcggccggga
tcggcgaagggagtgatgttcatcacgattgaggacgaaaccggtatcgccaacatcgtc
gtctggccaaagctcttcgagcggtcgcgccgcgtggtgcttggcgccagcatgatggcc
atcaacggcaggatccagcgcgaaggcgaggtggttcatctcgtcgcccagcagctcttt
gatctctcggccgacctgtcgagccttgccgagcgcgatggcgcatttcggccgccgact
ggccgtggcgacgaattcgcccatggttcgccgggcagcgcggattcccgcggaaaggct
cctccgggcgttcgcgcgagggacatactcgtgccggatcttcatatcgatacgctgaag
atcaagagccggaatttccagtag

All links

Pathway (6)   
   KEGG PATHWAY (6)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   RHIZOBASE-SME (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (3)   
   PROSITE (1)   
All databases (21)

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