KEGG T00058: SMc00480

Sinorhizobium meliloti 1021: SMc00480

Entry

SMc00480 CDS T00058

Gene name

icd

Definition

isocitrate dehydrogenase (EC:1.1.1.41)

Orthology

K00031

isocitrate dehydrogenase [EC:1.1.1.42]

Organism

sme Sinorhizobium meliloti 1021

Pathway

sme00020	Citrate cycle (TCA cycle)
sme00480	Glutathione metabolism
sme01100	Metabolic pathways
sme01110	Biosynthesis of secondary metabolites
sme01120	Microbial metabolism in diverse environments
sme01210	2-Oxocarboxylic acid metabolism
sme01230	Biosynthesis of amino acids

Module

sme_M00009	Citrate cycle (TCA cycle, Krebs cycle)
sme_M00010	Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:sme00020]
Metabolism; Metabolism of other amino acids; Glutathione metabolism [PATH:sme00480]

SSDB

Motif

Pfam:

Iso_dh

Other DBs

NCBI-GI:

NCBI-GeneID:

RhizoBase:

UniProt:

Structure

PDB:

3US8

Position

1937089..1938303

AA seq 404 aa
MAKIKVANPVVELDGDEMTRIIWQFIKDKLIHPYLDLDLEYYDLGVENRDATDDQVTIDA
ANAIKKHGVGVKCATITPDEGRVEEFKLKKMWKSPNGTIRNILGGVIFREPIICKNVPRL
VPGWTKPIIVGRHAFGDQYRATDFKFPGKGKLSIKFVGEDGQTIEHDVYDAPGAGVALAM
YNLDESITEFARASFNYGLQRKVPVYLSTKNTILKAYDGRFKDIFQKVFDEEFAAQFKAE
KLWYEHRLIDDMVASALKWSGGYVWACKNYDGDVQSDIVAQGFGSLGLMTSVLMTPDGKT
VEAEAAHGTVTRHYRQHQKGEETSTNSIASIFAWTRGLAHRAKLDGNAELAKFSETLERV
CVDTVESGFMTKDLALLIGPDQPWLSTTGFLDKIDENLRKAMAA

NT seq 1215 nt +upstreamnt +downstreamnt
atggcaaagatcaaggtcgccaatccggtcgtcgaactcgacggcgacgagatgacccgc
atcatctggcagttcatcaaggacaagctgatccacccttatctcgacctcgatctcgaa
tattacgacctgggcgtcgaaaaccgtgatgcaactgacgaccaggtgacgatcgacgcc
gcaaacgccatcaagaagcacggcgtcggcgtaaaatgcgccacgatcacgccggacgag
ggtcgcgtcgaggagttcaagctgaagaagatgtggaagtcgccgaacggcacgatccgc
aacatcctcggcggcgtcatcttccgcgagccgatcatctgcaagaacgtgccgcgcctg
gtccccggctggaccaagccgatcatcgtcggccgccacgccttcggcgaccagtaccgc
gcgaccgatttcaagttcccgggcaagggcaagctctcgatcaaattcgtcggcgaagac
ggccagacgatcgagcatgacgtttacgacgcgccgggcgccggcgtggcactcgccatg
tacaacctggacgaatcgatcaccgaattcgcgcgcgcctcgttcaactacggcctgcag
cgcaaggttccggtctatctctcgaccaagaacacgatcctgaaggcctatgacggccgc
ttcaaagacatcttccagaaggtgttcgacgaggaattcgccgcccagttcaaggccgag
aagctctggtacgaacaccgcctgatcgacgacatggtcgcctcggcgctgaagtggtcc
ggcggctatgtctgggcctgcaagaactacgacggcgacgtgcagtccgacatcgtcgcg
cagggcttcggctcgctcggcctgatgacctcggtgctgatgacgccggacggcaagacg
gtcgaggcggaagccgcccacggcacggtgacgcgccactaccgccagcatcagaagggc
gaggaaacctcgaccaactcgatcgcatcgatcttcgcctggacccgcggcctcgcccac
cgcgccaagctcgacggcaacgccgaactcgcgaagttctccgagaccctggagcgcgtc
tgcgtggatacggtcgagtccggcttcatgaccaaggatctggcacttctcatcggtccc
gaccagccctggctgtcgaccaccggtttcctcgacaagatcgacgagaacctcaggaag
gcaatggcggcgtaa

All links

Pathway (9)   
   KEGG PATHWAY (7)   
   KEGG MODULE (2)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
   RHIZOBASE-SME (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
3D Structure (1)   
   PDB (1)   
Protein domain (1)   
   Pfam (1)   
All databases (30)   

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