KEGG S.meliloti: SMc02606

Sinorhizobium meliloti: SMc02606

Entry

SMc02606 CDS S.meliloti

Gene name soxA1

Definition putative sarcosine oxidase alpha subunit transmembrane protein
(EC:1.5.3.1)

Orthology K00302 sarcosine oxidase, subunit alpha [EC:1.5.3.1]

Pathway sme00260 Glycine, serine and threonine metabolism
sme01100 Metabolic pathways

Class Metabolism; Amino Acid Metabolism; Glycine, serine and threonine
metabolism [PATH:sme00260]

SSDB

Motif Pfam: GCV_T GCV_T_C Pyr_redox_2 DAO HI0933_like FAD_binding_2 SoxG
FAD_binding_3 GIDA Thi4 Pyr_redox Lycopene_cycl

Other DBs NCBI-GI: 15963836
NCBI-GeneID: 1231714
RhizoBase: SMc02606
UniProt: O87386

Position complement(97908..100871)

AA seq 987 aa
MSSYRLPKRGLVDRNVPLSFTFDGRPMQGLEGDTLASALLANGRMLVGRSFKYHRPRGIL
TAGAAEPNALVTVGRGGRAEPNTRATMQELYEGLEARSQNRWPSLAFDIGALNGLLSPFL
GAGFYYKTFMWPAPLWEKLYEPVIRRAAGLGKASYEADPDAYEKSWAHCDLLVIGAGPTG
LAAALTAGRAGARVILVDEGSLPGGSLLSDTATIDGKAAADFARDTSDELRSMPNVQVLV
RTTAFGWYDGNVFGAVERVQKHVREPASHLPVERLWRIVAGKALLATGAEERPLVFGGND
RPGVMMAGAMRAYLNRYGVAPGRTPAIFTTNDTGYTLAQELEAAGVDVVAIVDSRPAAGV
DYRGKARLVREAVVCGTKGGKAISAIEVHHGGRTETIAVDALAMAGGFDPIIHLACHRGG
KPVWSAEKAAFLAPGSLKGLEVAGGAAATTGLAACLGEGAARAEAIVRELGLPCPPVAVV
KVESEEGIRSPAPLWSIPGIKDKAFVDFQNDVHLKDIGLAVREGYSHVELAKRYTTSGMA
TDQGKLSNVNAIGLIAKARGVSPAEVGTTTFRPFYTPVSFGALTGAHTGHHFQPVRKSPL
HDWAKKHGAVFVETGLWYRSSWFPRSGERTWRESVEREVLNVRKNAGLCDVSMLGKIEIT
GSDAAEFLNRVYCNAFLKLPVGKARYGLMLREDGFIYDDGTTSRLEENRFFMTTTTAYAA
GVMNHLEFCAQVLWPQLDVRLASITDQWAQMAIAGPKARMILQKIVDEDISDAAFPFLAA
KEVSLFGGALHGCLFRISFSGELAYELAVPAGYGESIADALLEAGKDHGIMPYGVETLSV
LRIEKGHVTHNEINGTIVPADLGFGKMVSAGKPDFVGKAMLQREGLTAPDRPQLVGVVPL
DPQQSFRSGSHILAKGAAATLENDEGYVTSSAYSPHVGSTIALALVRNGRNRHGEEVLVW
SGLHGESTPARLCNPVFFDPQNERLHV

NT seq 2964 nt +upstreamnt +downstreamnt
atgagctcctaccgtctgccgaaacgcggtcttgtcgaccgcaacgtcccgctctccttt
accttcgacggccgccccatgcagggcctggaaggcgacacgctcgcctcggcactgctt
gcgaacggtcggatgctcgtcggccgcagcttcaaatatcaccggccccgcgggatcctg
acggcgggggccgccgaaccgaacgcgctggtcaccgtgggccgcggcggccgcgccgag
ccgaacacgcgcgccaccatgcaggagctctacgagggtctcgaggcgcggagccagaac
cgctggccctcgctcgccttcgatatcggtgcgctgaacggtctgctgtcacctttcctc
ggcgccggcttctactacaagacgttcatgtggccggcgccgctctgggagaagctctac
gaaccggtcatccgcagggccgccggactcggcaaggcaagctacgaagcggatcccgac
gcctatgagaagagctgggcacattgcgacctgctggtcatcggcgccggtccgacggga
cttgccgcggcactcaccgccggccgcgccggcgcacgggtcattctcgtcgacgagggc
tcgctgcctggcggctcgctcctgtccgatacggcgacgatcgacggcaaggcggcggct
gatttcgcccgcgacacgagcgacgaactgcggtcgatgccgaatgtccaagtcctggta
cggacgaccgccttcggctggtatgacggcaacgtcttcggcgcggtcgagcgcgtgcag
aagcatgtgcgcgagcccgccagccatctgcctgtcgagaggctgtggcggatcgttgcc
ggaaaggccctgcttgcgacaggcgccgaagagcgcccgctcgtcttcggcggcaacgat
cgtccgggcgtgatgatggcaggcgcgatgcgcgcctatctcaaccgctacggcgtcgcc
ccgggccggacgcccgccatcttcaccaccaatgacaccggctatacgctcgcgcaggag
ctcgaggccgcgggcgtcgacgtcgtcgccatcgtcgacagccgcccggcggccggcgtc
gactatcgcggcaaagcacgccttgtccgggaagcggtggtttgcggcaccaagggcggc
aaggcgatctcggcgatcgaagtccatcacggcggtcggaccgaaacgatcgcggtcgat
gcgctcgccatggcgggcggcttcgacccgatcatccatcttgcctgccaccggggcggc
aagcccgtctggtctgcggaaaaggcggcatttctcgcgcccgggagcttgaaggggctc
gaggttgccggcggtgcagcagcgacgacgggcctcgctgcctgcctcggcgaaggcgcc
gcccgcgctgaagccatcgtcagggagctcggtctgccctgccccccggtcgccgttgtg
aaggtcgagagcgaggaagggatacgttcccctgccccgctctggtcgatccccggtatc
aaggacaaagccttcgtcgatttccagaacgacgtgcatctcaaggatatcggcctggcc
gtccgcgaaggctacagccatgtcgagcttgccaagcgctacaccaccagcggcatggcg
acggaccagggcaagctttcgaacgtcaatgcgatcgggttgatcgccaaggcacgcggc
gtctcgcccgccgaggtcgggacgacgaccttccgccctttctacacgccggtatccttc
ggtgcgctgaccggcgcgcatacgggccatcatttccagccggtccgcaaatcgccgctc
catgattgggcaaagaaacacggtgccgtcttcgttgagacgggtctctggtatcgatcc
tcctggtttccgcggagcggtgaacggacatggcgggagagcgtcgagcgagaagtgctg
aacgtgcggaagaatgccggactctgcgacgtctcgatgctcggcaagatcgagataaca
ggaagcgacgccgccgaattcctcaatcgcgtatactgcaacgccttcctcaaactgccc
gtcggaaaggcgcgttacgggcttatgctgcgcgaggacggcttcatctacgacgacggc
acgaccagccgcctcgaggagaaccgctttttcatgacgacgaccaccgcctatgcggcc
ggcgtcatgaaccacctcgaattctgtgcgcaggtgctctggccgcaactggacgtgcgt
ctcgcctccatcaccgaccagtgggcgcaaatggcgattgccggtccgaaggcacgcatg
atcctgcagaagatcgtcgatgaggatatatccgacgcggcgttcccgtttcttgcagcg
aaggaggtttcgctgttcggaggcgcccttcacggctgcctctttcggatttccttctcc
ggcgaactcgcctacgaacttgcggttccggccggctatggcgagagcatcgccgatgcc
ctcctggaggcggggaaggatcacggcatcatgccttacggcgtcgagacgctcagcgtt
ctgcgcatcgagaagggccatgtgacgcacaacgagatcaacggcaccatcgtgccggcc
gatctgggcttcgggaaaatggtttcggccggcaaaccggatttcgtcggcaaggcgatg
cttcagcgggaggggctgaccgcgcccgaccggccgcagctggtgggcgtcgtgccgctc
gatccgcaacagtcgttccgcagcggctcgcacattctcgccaagggggcggcagccacg
ctcgaaaacgacgagggctatgtcacctcgagcgcctattcgccgcatgtcggatccacc
atcgcgctggcactggtcaggaacggccgcaaccgtcacggcgaagaggtgctggtctgg
agtggccttcacggagaatccacgcctgcgcgtctctgcaatccggttttcttcgaccct
cagaacgagaggctccatgtctga

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   RHIZOBASE-SME (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (12)   
   Pfam (12)   
All databases (25)

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