KEGG   Sinorhizobium meliloti GR4: C770_GR4Chr1181
Entry
C770_GR4Chr1181   CDS       T02405                                 
Name
(GenBank) excinuclease ABC, C subunit
  KO
K03703  excinuclease ABC subunit C
Organism
smeg  Sinorhizobium meliloti GR4
Pathway
smeg03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:smeg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    C770_GR4Chr1181
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:smeg03400]
    C770_GR4Chr1181
DNA repair and recombination proteins [BR:smeg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     C770_GR4Chr1181
SSDB
Motif
Pfam: UvrC_RNaseH_dom GIY-YIG UVR HHH_5 HHH_2 HHH
Other DBs
NCBI-ProteinID: AGA06142
Position
complement(1244115..1246139)
AA seq 674 aa
MNGQTPTDGGILYDATETDDEDDLVEVTEAERPAPAIGWAESLPEAAGLKGAELIQAFVK
RLPNGPGVYRMLNEAGDVLYVGKARSLKKRVSNYAQGRGHSNRIARMVRETAHMEFVTTR
TEIEALLLEANLIKRLRPRFNVLLRDDKSFPYIVVTGDTRAPALYKHRGARSRKGDYFGP
FASAGAVGRTINSLQRAFLLRTCTDSVFETRTRPCLLYQIKRCSAPCTNEVSDADYAELV
SEAKDFLSGKSQAVKATIASAMAEASENLDFERAALYRDRLAALSHVQSHQGINPAGVEE
ADVFAIHHEGGISCIQVFFFRTGQNWGNRAYFPKADPSIPPAEVLSAFLAQFYDDKPCPR
QVLLCAPVEEQELLAQALSEKSGYKVSILVPQRGEKKDLVEHALANAREAHGRKLAETAS
QGRLLEGFAATFQLPYVPRRIEIYDNSHIMGTNAVGGMVVAGPEGFVKGQYRKFNIKSTD
ITPGDDFGMMREVMTRRFSRLLKEEGKPDRSAEPGEDAGFPAWPDVILIDGGQGQMTAVR
TILKELGIEDCVTAIGVAKGVDRDAGRERFFAEGRESFTLPPRDPVLYFIQRLRDEAHRF
AIGSHRARRKKEMVKNPLDEIAGIGPTRKRALLTHFGTAKAVSRAGINDLMSVNGISETV
ARIVYEHFHEDAAK
NT seq 2025 nt   +upstreamnt  +downstreamnt
atgaacgggcagacgcccaccgatggcggcatcctttacgacgccacggagaccgacgac
gaagacgatctggtcgaagtgaccgaggccgaacggccggcgccggcaataggatgggcg
gagagcctgccggaagcggcgggcctcaagggagccgaactcatccaggccttcgtcaag
cgcctgccgaacgggcccggcgtctaccggatgctcaacgaggccggcgacgtgctctat
gtcggcaaggcccgcagcctgaagaagcgggtgagcaactatgcgcaggggcgaggccac
tcgaaccgcatcgcgcgcatggtccgcgagactgcgcatatggaattcgtgacgacgcgg
acggagatcgaggcgctgctgctcgaagcaaacctcatcaagcgcctgcgcccgcgcttc
aacgtgcttctgcgcgacgacaagtccttcccctatatcgtcgtcaccggcgatacgcgt
gcgccggcgctctacaagcatcgtggggcgcgcagccgcaagggcgactatttcggcccc
ttcgcctcggccggagcagtcggacgcacgatcaactcgctgcagcgcgcctttcttctc
agaacctgcaccgacagtgtcttcgaaacacgcacgcgcccctgtctgctctatcagatc
aagcgttgttccgcgccgtgcacgaacgaggtcagcgatgcggattacgcggaactggtc
agcgaagccaaggattttctctccggcaagagccaggcggtgaaggcgaccattgcctcc
gccatggccgaggcttcggagaacctcgatttcgagcgtgccgcgctttaccgcgaccgg
ctggccgcgctgagccacgtccagagccaccagggcatcaatccggccggcgtcgaggaa
gcggacgtcttcgccatccatcacgaaggcggcatctcctgcatccaggtgtttttcttc
cggacggggcagaactggggcaatcgcgcctattttccgaaagccgatccttcgattccc
cctgccgaggtgctcagcgcgtttcttgcgcagttctatgacgacaagccctgtccgcgg
caggtcctgctctgcgcccccgtcgaggaacaggaactgcttgcacaggcgctcagcgag
aaatccggctacaaggtctcgatcctcgtgccgcagcgcggagagaagaaggatctcgtc
gagcatgcgctcgcaaacgcccgcgaggcgcatggccgcaagctcgccgaaacggcttcg
caggggcgcctgctcgaaggctttgccgcaaccttccaactcccttacgtgccgcgccgc
atcgagatctacgacaactcgcatattatgggcaccaatgcggtgggcggcatggtcgtc
gccggcccggagggcttcgtcaaaggccagtaccgaaagttcaacataaaatcgaccgac
atcacgccgggcgacgatttcggcatgatgcgcgaggtcatgacgcggcgcttctcccgc
ctcctgaaagaagagggcaagccggatcggtccgcagagccgggtgaggatgccggtttc
cccgcgtggcccgacgtcatcctgatcgatggcggccagggccagatgacggcagttcgt
acgattctcaaggaactcggcattgaggactgcgtgacggcgatcggcgtcgccaagggc
gtcgaccgcgacgccgggcgcgagcgtttcttcgccgaaggccgggaaagcttcactctg
ccgccgcgcgaccccgtcctctacttcatccagcgtctgcgcgacgaagcgcaccgtttc
gcgatcggctcgcaccgggctcgccggaaaaaggaaatggtcaagaatccgctcgacgag
atcgccggaatcggcccgacgcgcaaacgcgcgctcctcacccatttcggaaccgccaaa
gccgtctcccgcgccggcatcaacgacctgatgtcggtaaacggcatttccgaaacggtc
gcccgtatcgtctacgagcatttccacgaagacgccgccaaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (13)   

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