KEGG   Sinorhizobium meliloti GR4: C770_GR4pC0191Help
Entry
C770_GR4pC0191    CDS       T02405                                 

Definition
DNA ligase D (EC:6.5.1.1)
Orthology
K01971  
DNA ligase (ATP) [EC:6.5.1.1]
Organism
smeg  Sinorhizobium meliloti GR4
Pathway
Base excision repair
Nucleotide excision repair
Mismatch repair
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:smeg00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    C770_GR4pC0191
   03420 Nucleotide excision repair
    C770_GR4pC0191
   03430 Mismatch repair
    C770_GR4pC0191
   03450 Non-homologous end-joining
    C770_GR4pC0191
Enzymes [BR:smeg01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     C770_GR4pC0191
DNA repair and recombination proteins [BR:smeg03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      C770_GR4pC0191
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
pRmeGR4c:196713..199349
Genome map
AA seq 878 aa AA seqDB search
MADNLSKYRAKRDFKKTREPSGEAQVKPSNRRRFVIQKHDATRLHYDLRLELDGVFKSWA
VTKGPSLDPSDKRLAVEVEDHPLDYGDFEGTIPKGQYGGGTVMLWDRGYWEPEGRKSPEE
ALKKGDFKFTLHGKRLHGSFVLVRMRNDRDGGKRTNWLLIKHRNDYSVDENGAAILEENA
TSIASGRSMEQIAEGTGRKPRPFMMANADVEADAVWDSKHGLAAEERKKGSRRDVATSTA
ADLPDFIEPQLCETLARPPASDDWLHEIKFDGYRIQMRIADGKVTLKTRKGLDWTAKYPE
IADAASELPDCIIDGEICALDDNGAPDFAALQAALSEGKTGNLVYFAFDLLFDGGEDLRS
MRLVERKKRLEDFLAAGSDDPRIRYVDHFESGGDAVLRSACKLSLEGIVSKQMDAPYQSG
RTDTWAKSKCRAGHEVVIGGYATTNGKFRSLLVGVHRGDHFVYVGRVGTGFGAAKVERFF
PKLKALEASKSPFTGIGAPKKEKEVTWLKPELVAEIEFAGWTADGLVRQAAFKGLREDKP
AKEVQAEKPSPPARTDTPEPGPSAKTRPVRRKGAKAEVMGVLISSPDKPLWPDAGDGEPV
TKEDLARYHEAVGTWLIDHIKGRPCSIIRAPDGIGGEQFFQRHAMPGTSNLLKLVKVFGD
KKPYLQIDRIEGLAAIAQIGGIELHPWNCEPGKPEVPGRLVFDLDPGPDVPFATVVAAAR
EMRDRLDELGLVSFCKTTGGKGLHVVTPFAVNKRKPLSWAEAKGFAHDVCEQMARDNPDL
YLIKMSKSLRGGRIFLDYLRNDRMATAVAPLSPRARPGATVSMPLNWTQVKSDLYPKRFT
VRTVPALLAKTTAWQDYCDGERPLEQAIKRLGKSRRAA
NT seq 2637 nt NT seq  +upstreamnt  +downstreamnt
atggctgacaatctttcgaaataccgtgccaagcgcgatttcaagaaaaccagagaacca
agcggcgaggctcaggtcaagccgtcgaaccgccggcggttcgtgatccagaagcacgac
gccacccggcttcactatgatctgcggcttgaactggacggggtgttcaagagctgggcg
gtgaccaagggcccatcgctcgatcctagtgacaagcgactggcagtcgaagtcgaagat
cacccgctcgactatggcgacttcgaaggcacgattccaaagggccagtatggcggcggc
acggtcatgctatgggaccgcggctattgggagccagaaggtaggaagtcacctgaagag
gccctgaagaagggcgacttcaagttcacgcttcatggcaagcggctgcatggcagcttc
gtcctggtgcggatgcgcaacgatcgcgatggcggcaagcggaccaactggctgctcatc
aaacatcgtaacgattactccgttgacgagaacggcgcggcaatcctggaggagaacgcg
acttccatcgcctccggccgcagcatggagcagatcgccgagggcacgggccgcaagcca
cgaccgttcatgatggcgaacgcggatgtcgaggcagatgccgtctgggacagcaagcat
ggcttggctgcggaagagcgcaagaaggggtctcgcagggatgtcgcgacctccacggca
gccgacctgccggattttatcgagccgcagctctgcgagacgcttgcgcggccgccggcc
agcgacgactggctgcatgagatcaagttcgacggttatcggatccagatgcggattgcc
gacggtaaggtgacgctgaagacgcgcaagggtctcgactggaccgcgaaatatccagag
atcgccgatgctgcgtccgaattgcccgattgcatcattgatggcgaaatctgcgccctc
gacgacaatggcgcgcccgatttcgcagcactccaggccgcgctctcggaaggcaagacc
ggcaaccttgtctacttcgccttcgacctgctgtttgatggcggcgaggacttgcggtcg
atgcgattggtcgagcggaagaagcggctcgaagacttcctcgcggccgggagcgacgat
ccgcgtatccgctacgtcgatcacttcgaatccggcggtgacgcggtgctccgctccgcc
tgcaagctgtcgctcgaaggtatcgtctccaagcagatggatgcgccctaccaatcgggc
cgcaccgacacctgggcgaagtcgaaatgccgggctggtcatgaggtggtgatcggtggc
tatgctacgaccaacggcaagtttcgatctctcctggtcggcgttcaccgcggcgatcac
ttcgtctatgtcggccgggtcggcacgggcttcggcgccgcgaaggtcgagcggttcttt
cccaagctgaaggcgttggaagcatcgaagtcacccttcaccggcatcggtgcgccgaaa
aaggagaaggaagtcacctggctgaaaccggagctcgttgccgagatcgagttcgccggc
tggacggccgacggcctagttcgtcaggcagccttcaaaggcctgcgcgaggacaagccg
gcgaaagaggtccaggccgagaagccgtcaccgcccgccaggaccgacacgcccgagcct
gggccgtccgccaagaccagaccggtgcggcgcaagggcgccaaggccgaggtcatgggc
gtcctcatctccagtcccgacaagccactctggccggacgccggcgatggcgaacccgtg
accaaggaagatctcgcccgctaccatgaagccgtcggaacctggctcatcgatcacatc
aagggccggccctgctcgatcattcgagcgcccgacggcattggcggcgagcagttcttc
cagcgccatgcgatgccaggcacctccaatctgctcaaactggtgaaagtcttcggggac
aagaagccctaccttcagatcgatcggatcgaagggctcgcggcgatcgcccagatcggc
ggaatcgaactacatccgtggaactgcgaacccggcaagccggaagtgcccggccgtctg
gtgttcgatctcgatcctggtcccgacgtgccgtttgcgacagtggtcgcggccgcgcgg
gaaatgcgtgaccggctcgacgagctcggcctcgtcagtttctgcaagacgaccggcggg
aagggattgcatgtcgtcacgccattcgctgtgaataagcgcaagcctttgtcatgggcc
gaggctaagggattcgcgcatgacgtttgcgagcaaatggcgcgcgataatcccgatctt
tatctcatcaagatgagcaagagcctcaggggcggaaggatcttcctcgattatctccgc
aacgaccgcatggcgaccgccgtggcgccactgtcgccgcgcgcacggcccggcgccaca
gtctcgatgccgctcaactggacgcaggtgaagtccgatctctacccgaagcggtttacc
gtccgcaccgtgccggcgctgcttgcgaaaaccactgcctggcaagactattgtgatggc
gagcggccgctcgaacaggcgatcaagcgcctcggaaaatcaagacgggctgcgtga

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