KEGG   Sinorhizobium meliloti GR4: C770_GR4pD0040Help
Entry
C770_GR4pD0040    CDS       T02405                                 

Definition
ATP-dependent DNA ligase (EC:6.5.1.1)
Orthology
K01971  
DNA ligase (ATP) [EC:6.5.1.1]
Organism
smeg  Sinorhizobium meliloti GR4
Pathway
Base excision repair
Nucleotide excision repair
Mismatch repair
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:smeg00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    C770_GR4pD0040
   03420 Nucleotide excision repair
    C770_GR4pD0040
   03430 Mismatch repair
    C770_GR4pD0040
   03450 Non-homologous end-joining
    C770_GR4pD0040
Enzymes [BR:smeg01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     C770_GR4pD0040
DNA repair and recombination proteins [BR:smeg03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      C770_GR4pD0040
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
pRmeGR4d:complement(45665..46732)
Genome map
AA seq 355 aa AA seqDB search
MASSAHGKPTKKAAPSSAAKKAGGFPLPVTTAPMEARSATELPGGDAWQYEPKWDGFRCL
AFKSGDEVDIRAKSGKPLGRFFPEIVALLRRLEPDMFVLDGELVIEVDGRLSFDALQMRL
HPAASRVQKLSQETPAKLILFDMLAGTDGTILTGEPLQTRRACLEAFAKKNAVAGMLESS
PFTLDIEEAERWLTSWEACATDGVVAKRRDGVYECGERAMVKVKRLKTADCVVGGFRYES
DSSLVGSLLLGLYDTEGLLNHVGFTATISDKERPALTNQLEALREPPGFTGKAPGGPSRW
SSERSGEWEPVRPELVVEVRFDHVSNRRFRHGTKLMRWRPDKDPRQCTYQQIMPS
NT seq 1068 nt NT seq  +upstreamnt  +downstreamnt
atggcgtcgtccgcacatggaaagccgacgaagaaggccgctccgtcaagcgcggcaaag
aaggcgggcggctttcccctgcccgtcaccacggcgccgatggaggcccgatccgcgacc
gagcttccgggcggcgacgcatggcagtatgagccgaagtgggacggctttcgctgcctt
gcgttcaagtccggcgacgaagtcgatataagggcgaaatccggcaagccgctcgggcgc
ttcttcccggagatcgtcgccctcttgcgccggctggagccggacatgttcgtcctcgac
ggcgaactggtgatcgaggtcgacgggcgcctctccttcgacgccctgcagatgcgcctg
catccggcggcaagtcgcgtgcagaagctctcgcaggagacgccggccaagctcatcctg
ttcgacatgctggccggcacggacggaacgatcctgaccggtgaacccctccagacccgc
cgcgcctgcctcgaagccttcgccaagaagaacgccgttgctgggatgctggagtcttcg
cccttcacgctcgacatcgaggaggccgagcggtggctcacctcatgggaggcgtgtgca
accgacggggtcgtcgcaaagcggcgcgacggcgtatacgaatgcggcgaaagggcaatg
gtgaaggtcaaacggctgaagacggccgattgcgtcgtcggcggcttccgttacgagagc
gacagctctttggtgggctcgcttctgctcggcctttacgacaccgagggactgctgaac
catgtgggctttaccgcgacgatctcggacaaggagcggcccgccttgaccaaccagctc
gaagcattgcgggagccgccgggcttcaccggcaaagcgccgggcgggcccagccgctgg
agcagcgagcgcagcggcgaatgggagccggttcgcccggaactggtcgtcgaagtccgg
ttcgaccatgttagcaaccggcgcttccgtcacggtacgaagctcatgcgctggcggccg
gacaaggacccgcgccaatgtacctatcagcagatcatgccgtcgtga

DBGET integrated database retrieval system