KEGG   Breviolum minutum: v1.2.015586.t1
Entry
v1.2.015586.t1    CDS       T04349                                 
Symbol
symbB.v1.2.015586.t1
Name
(OIST) -
  KO
K13525  transitional endoplasmic reticulum ATPase
Organism
smin  Breviolum minutum
Pathway
smin04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:smin00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    v1.2.015586.t1 (symbB.v1.2.015586.t1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smin03019]
    v1.2.015586.t1 (symbB.v1.2.015586.t1)
   03009 Ribosome biogenesis [BR:smin03009]
    v1.2.015586.t1 (symbB.v1.2.015586.t1)
   04131 Membrane trafficking [BR:smin04131]
    v1.2.015586.t1 (symbB.v1.2.015586.t1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:smin04147]
    v1.2.015586.t1 (symbB.v1.2.015586.t1)
Messenger RNA biogenesis [BR:smin03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     v1.2.015586.t1 (symbB.v1.2.015586.t1)
Ribosome biogenesis [BR:smin03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    v1.2.015586.t1 (symbB.v1.2.015586.t1)
Membrane trafficking [BR:smin04131]
 SNARE
  SNARE associated proteins
   Others
    v1.2.015586.t1 (symbB.v1.2.015586.t1)
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    v1.2.015586.t1 (symbB.v1.2.015586.t1)
Exosome [BR:smin04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   v1.2.015586.t1 (symbB.v1.2.015586.t1)
SSDB
Motif
Pfam: AAA AAA_lid_3 CDC48_N RuvB_N AAA_16 AAA_5 AAA_33 TIP49 AAA_2 AAA_14 CDC48_2 AAA_22 nSTAND3 RNA_helicase AAA_17 AAA_18 AAA_28 Mg_chelatase Parvo_NS1 ATPase_2 IstB_IS21 Bac_DnaA AAA_7 AAA_25 NACHT ResIII ABC_tran Zeta_toxin AAA_24 NB-ARC Viral_helicase1 TsaE Sigma54_activat Sigma54_activ_2 DUF815 KAP_NTPase SLFN-g3_helicase Vps4_C Zot PDCD10_N
AA seq 750 aa
MEELNLFRGDNVLIKGKKRKDTVCIVLADEALDDSKIRMNKVVRKNLRVRLGDIVSVHAC
GDVPYGKRIHVLPLDDTIEGITGNLFDTYLKPYFLEAYRPARQGDLFLVRGGFRPVEFKV
VGVDPGEFVIVAPDTVIHCEGEPVKREDEERLDDVGYDDIGGCKKAMGQIREMIELPLRH
PTLFKTLGVKPPRGVLLYGPPGSGKTLIARAIANETGAFFFLINGPEIMSKMAGEAESNL
RKAFEEAEKNSPAIIFIDEIDSIAPKRDKTSGEVEKRVVSQMLTLMDGIKGRGQVVVIAA
TNRPNSIDAALRRFGRFDRELDIGVPDDNGRLEILRIHTKNMKLATDVKLEEVASNTHGF
VGADLAQLCTEAALTCIREKMDLIDLEEETIDAEILDSMAASQEHFKSAMGTVNPSSLRE
TVVEVPNIKWDDIGGLEETKRSLQETILYPIDHPEKFEKFGMQPSRGVLFYGPPGCGKTL
LAKAVASECSANFVSIKGPELLTMWFGESEANVREVFDKARAAAPCVLFFDELDSIGTAR
GSSQGDAGGAGDRVMNQLLTEIDGVGAKKNVFFIGATNRPELLDEALLRPGRLDQLIYIP
LPDLPARQGILESTLKKSPVAPNVPLPFVAQKTEGFSGADLAELCQRAAKAAVRDAIAAD
ELRAGDDDAMDTTMGSEIGRKHFEEAFGGARRSVAGSDLAKYDQFRKKFDPIYMNSTAGG
GSSGVVINWPDDVGIGAGAAAADDDDDLYG
NT seq 2583 nt   +upstreamnt  +downstreamnt
gggaatttgggaccggggcgcctcagcttgaccacttcatccaaggatcaccatggctga
cgctgagaatacagcagcagatgttcccattgaagctccagcaagaccaacgaagaaacg
gtccccgaaccgcctggtcgtcgaagaggcgatgaatgatgacaattcagtgatttcgct
gtcgcaagcgaagatggaagagttgaacctctttcgcggcgacaacgtcttgatcaaggg
caagaagcgcaaagacacagtatgcatcgtcctagccgatgaagctttggatgatagcaa
gatccgcatgaacaaggtggtgcgcaagaatcttcgagttcggctcggtgacattgtgtc
agtgcatgcctgtggcgatgtaccttatggaaagcgcattcatgtgcttcccttggatga
caccattgagggcatcaccggcaaccttttcgacacctacttgaagccgtacttcctgga
agcctaccgtccagcccgtcaaggtgaccttttcttggttcgtggtggttttaggcctgt
ggagttcaaggttgtgggtgttgatccaggtgaattcgtcattgtagcaccagatactgt
gatccactgcgagggcgagcctgtgaagcgagaggatgaggaacgcttggatgatgtggg
ttatgatgacattggtggctgcaagaaagccatgggacaaattcgagagatgattgagct
gcctttgcgtcacccaacccttttcaagacactgggggtaaagcctccacgaggtgtcct
tttgtatggccctccaggtagtggaaagactctgattgcccgtgccattgccaatgagac
cggtgcctttttcttcctgatcaacggtccagagattatgagcaagatggcaggtgaggc
agagtcaaatttgagaaaggcattcgaagaggctgagaagaactcaccagctatcatttt
cattgatgaaattgattccattgctcccaagagagacaagacaagtggtgaagttgagaa
gagggtggtctcacagatgttgaccctcatggatggtatcaaaggccgtggccaagtggt
agtcattgcagccaccaataggcccaactccattgatgcagccttgcgtcgatttggccg
atttgatcgcgagttggacatcggagtgcctgacgacaatggcaggcttgaaatcttgag
aatccacaccaagaacatgaagttggccacagatgtgaagctcgaagaagttgcctccaa
cactcatggctttgttggagcagatttggcccagctttgcacagaagcagctttgacttg
catccgggaaaagatggacctcattgacctggaggaggagaccattgatgcggagatttt
ggactcgatggctgcgagccaagagcacttcaaatctgcaatgggcactgtgaacccatc
atctcttcgtgagacggtggttgaagtgccaaacatcaagtgggatgacatcggtggctt
ggaggagaccaagcgttccttgcaggagaccattttgtatcccattgaccatccagagaa
attcgagaagttcggcatgcaaccttcccgaggagtgttgttctatggtccacctggttg
tggcaagactctgttggccaaagctgtggctagtgaatgttctgccaactttgtgagcat
caagggacctgaattgctgaccatgtggttcggagaatccgaagccaatgtgcgtgaagt
ctttgacaaagcccgtgcggcagccccatgcgtcctgtttttcgatgagctggactctat
cggcactgctcgtggctctagtcagggagatgcaggtggtgccggtgatcgtgtcatgaa
tcagctcttgacagagatcgacggtgtgggagcaaagaagaatgtcttcttcattggtgc
caccaataggccagaactactggacgaagccttgcttcgtccaggtcgtttggatcagtt
gatctacatcccattgccagacctgccggcaagacaaggcatcctggaatcaacattgaa
gaagtccccagtggcccccaatgtgccactgcctttcgttgcacagaagactgagggctt
cagtggagctgacttggcagagctttgccaacgcgctgccaaggctgctgtcagggatgc
tattgccgcagatgagttgagggctggtgatgatgatgccatggacactaccatggggtc
agagattggccgcaagcactttgaagaagcctttggcggggccaggcgatcagtggctgg
atctgaccttgcaaagtatgaccaattcaggaagaaatttgaccccatctacatgaactc
cactgctggtggtggcagctctggtgttgtgatcaactggccagatgatgttggcattgg
agccggtgcagccgcagctgatgatgacgatgacctttatggctgagtgatggctttctg
atgccagcggtttcatctaacgagtagacgacgtcaccccgaaaactgattcggaaagtg
ctggagatgccccttcagcggatattttagacaatacgcttgtaataacagtgtgtaaag
att

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2574)   
   KEGG ORTHOLOGY (1)   
   RefGene (2572)   
   OC (1)   
Protein domain (40)   
   Pfam (40)   
All databases (2621)   

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