KEGG   Breviolum minutum: v1.2.021833.t1
Entry
v1.2.021833.t1    CDS       T04349                                 
Symbol
symbB.v1.2.021833.t1
Name
(OIST) -
  KO
K10839  UV excision repair protein RAD23
Organism
smin  Breviolum minutum
Pathway
smin03420  Nucleotide excision repair
smin04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:smin00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    v1.2.021833.t1 (symbB.v1.2.021833.t1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    v1.2.021833.t1 (symbB.v1.2.021833.t1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:smin03051]
    v1.2.021833.t1 (symbB.v1.2.021833.t1)
   03400 DNA repair and recombination proteins [BR:smin03400]
    v1.2.021833.t1 (symbB.v1.2.021833.t1)
Proteasome [BR:smin03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    v1.2.021833.t1 (symbB.v1.2.021833.t1)
DNA repair and recombination proteins [BR:smin03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      v1.2.021833.t1 (symbB.v1.2.021833.t1)
SSDB
Motif
Pfam: UBA ubiquitin XPC-binding Rad60-SLD CUE Rad60-SLD_2 YukD NTP_transf_3
AA seq 333 aa
MKLQVRPLKGETFDLEVEPAWTVEAVKAAVATVKPELAAELQKVLFKGKVLQDADTLQDH
GIIDGDFVVIMMAKTKEAPPPAAPAPPVAPAAAASAPPADAAAQAAQAAENELAINSLCD
MGFPRELVRQCLRAAFNNPDRAVEYLTSGIPAHLQHLATGEAPPPPATPAPTPAPVIPAP
PPQPPMIPPQVQQDTGPLAQLANHPRFNQLRAAVQQHPSTLNQVLTLIAKGDPNMIAEIA
EHQEEFVRLLSLPPAPNDPITAMLQAAQAGGVAPGAPGQQAPAPPPQLGAAGEEAIQRLQ
QLGFARNLCVEAYLACERNEEMAANFLFDRMEE
NT seq 1150 nt   +upstreamnt  +downstreamnt
tctttgtgcctttgacgtggaggtcaaaggtgcaaaaaccatgaaattgcaggtgagacc
cttgaaaggggaaactttcgacctggaagttgagccagcttggacagttgaggctgtcaa
agcagcagtagccaccgtgaagcccgaactagcagctgagttgcagaaagtcttgttcaa
gggcaaggtgttgcaagatgctgacacactgcaggaccatggtattattgatggtgactt
tgttgtcatcatgatggcaaagaccaaggaagccccgcctcctgctgctcctgcacctcc
ggtggcgccagcggcggcggcttcagcaccgccagctgatgcagcagcccaagcagccca
agcagccgaaaatgagttggcaataaacagtctgtgtgacatgggttttcccagagagct
agtaaggcaatgcttgcgggcagccttcaacaatccggatagagctgtagagtacttgac
aagcggcattccagcgcatctccagcatttggcgacgggtgaagctccaccacctcctgc
aacaccagctccaactccagcacccgtcattcctgctcctccacctcaaccgccgatgat
ccctccacaagtgcaacaagacacaggacctttggcgcagctggccaaccatccaaggtt
caatcagcttcgagcagctgtgcaacaacatcctagcaccttaaaccaagttctgacttt
gatcgcgaagggtgatcccaacatgatcgcagagattgctgagcaccaggaagagtttgt
gcgactgttgtcgctgcccccggcaccaaacgatcccattacagccatgcttcaagcagc
ccaggctggaggtgtggcacctggtgcacctggccagcaagcaccagcaccaccgcctca
acttggagcagccggtgaagaggccatccagcgtttgcaacagcttggatttgctcgaaa
cttgtgtgtggaagcatacttggcatgtgagagaaacgaggagatggcagccaactttct
cttcgatcgaatggaggagtaaactagccatggcggaaaaaggaggaacaagttttgaga
agctgcagactggcccttaatgcactgtttgtgttgaaactggcagtttgaacaaattgc
ccaatacgta

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (309)   
   KEGG ORTHOLOGY (1)   
   RefGene (307)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (323)   

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