KEGG   Breviolum minutum: v1.2.033400.t2
Entry
v1.2.033400.t2    CDS       T04349                                 
Symbol
symbB.v1.2.033400.t2
Name
(OIST) -
  KO
K12842  U2-associated protein SR140
Organism
smin  Breviolum minutum
Pathway
smin03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:smin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    v1.2.033400.t2 (symbB.v1.2.033400.t2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:smin03041]
    v1.2.033400.t2 (symbB.v1.2.033400.t2)
Spliceosome [BR:smin03041]
 Complex A
  U2 snRNP components
   U2 related factors
    v1.2.033400.t2 (symbB.v1.2.033400.t2)
 Complex B
    v1.2.033400.t2 (symbB.v1.2.033400.t2)
SSDB
Motif
Pfam: Surp RRM_1 CID RRM_5 CTK3
AA seq 931 aa
MWRPGLPPPPAAGYMQAAGYAHAGAQPGRYAPGPGGHTPPPASRMSASGSSAAQRGPGRR
EMDSLLEELKAKQEQRKELTEKKENDGLPQGDAGVPAVNANFPNFPVAPPPAVGRPPPSE
IVRPPTALGSSGGSSWGAGGASAAADELASVLFLRELPPSASEDAICTLFSRYGTVTAVD
IVRNRDDGRIQGYVMVDNRENAQRAKDALQDRELDGVPLWIEWSKSHAPQGIQVETGALS
KDGKSRVVIVEIPADTKKRRTIDRLARYVSQEGYQFEKLIMQRESPEGMFDFLFHHDSPE
NIYYRWRMFAFTQRDNFKVWRTQTFRIYEGGRWWRPPACEAAIEAVEKKKQSKFSSSAAE
DASPQNAAASQVPNPATAVKAARGTAVLPAHWTQEDIDEERERQRLEERATQERQKRDRN
RSIAGGKRLSDEDWSQLEQLLRNVSSTRASIMETMVFCLDKSEWAIEIAETIAESLTIAE
TEIPLKVARLLVVSDILHNTTSSRQAAWTYRREFEKSLPDIFEQFEIGLQRSESKLQVSQ
TKDQIVRLLKVWEDWGLFAPQYLRGLEAAVIIGVRRLRLLSNKGDLSREPAWLEPKLADW
RRQHFSQLEKMCRTRGLRCSTAHLEPTKQQSLEEARKEWLIDRLVTYELLAYDKEQARLQ
QAKEDAANKLSRRRSKYAMDDIDGEDCGDGFPMDEGELDGEPIDLSTPGDIYNAVEMAKQ
APEALASYLGTASAGAVLGSVMNSSPAASAAEEVVSVISSEEAAEAADDKEMLDVQQSSA
QETTEASQPELSLCVALGRSVVAMTTEDSKQRAAYSGRQSTSTRNPHTASKAVDVKALAK
LSIEDRVLAQWRAACGCPISDEAKTQFRIECLGRTFNLADVRLWQNHVPGKGSQASIYLE
FFFDGSPDELEDQEEARQSWLLSRKRWLLTP
NT seq 3010 nt   +upstreamnt  +downstreamnt
cccaaaactcctatgttttgtttctgcagatttgtcctcccatccacaacatcgagaggc
tatgtggaggcccggattgccaccaccaccagcagcgggctacatgcaggcagcaggcta
tgcacacgcaggggcgcagcctggccgatatgccccgggccctggaggacacaccccacc
cccagcttcaagaatgtcagcatcggggtcatccgcagcgcagcggggccctgggcgacg
tgagatggactcactgctggaagaactcaaagcgaagcaggagcagagaaaagagctaac
agaaaaaaaagaaaatgatggcttgccacaaggagatgctggagtcccggctgtgaatgc
caacttcccaaactttcctgtggcacctccaccggcagtaggccgaccccctccgagcga
aattgttcgaccgccaacggcattgggcagctctggaggaagttcttggggagccggtgg
tgcaagtgccgccgcggatgaactggcttcagtactctttttgcgtgagctgcctccctc
tgcatccgaggacgctatttgcactctcttctccagatatggcacagtcactgctgtcga
catcgtgcgaaaccgggatgatggccgcatccaaggctatgtcatggttgataatcggga
gaatgctcagagggcaaaggacgcactgcaggatagagaattggacggagtgccgctgtg
gattgagtggtccaagagccatgctccacagggcattcaagttgagactggagcactaag
caaggatgggaaatcccgggtcgtcattgttgaaatcccagcagataccaaaaagaggcg
gacgattgacagacttgccaggtatgtgtctcaagagggctatcagtttgaaaagctcat
catgcagcgagagtctccagagggaatgtttgacttccttttccaccatgactcgcctga
gaacatatactatcgatggaggatgtttgcttttacacagcgcgacaacttcaaggtgtg
gcgtacccaaacattccgcatctacgagggtggccgatggtggagaccaccggcatgtga
agctgctatagaagctgttgagaagaaaaaacaatcaaaattttcttcctcagcagcaga
ggatgcaagtccacagaacgcggcagcaagccaagtgccgaatcctgcgactgcagtgaa
ggctgcacgaggcactgccgtgcttcctgcacattggacgcaggaggacatcgacgagga
gcgtgaacgtcagagactagaggaacgagcaacgcaggaacgccagaagcgtgaccggaa
ccggtccattgctggaggtaaacgcctcagcgatgaggactggtctcagcttgagcagct
cctgcggaatgtctccagcaccagggcttcaattatggaaaccatggtgttttgccttga
caagagtgaatgggcgattgagattgcagagacgattgccgagtctctaaccattgcaga
aaccgagattccactcaaggtggcaaggcttctggtggtcagcgacattcttcacaacac
cactagctcgcggcaagcagcttggacgtaccgcagagagttcgaaaagtccttgcccga
tatttttgagcagtttgagatcggcctgcaacgatcagagagcaagctgcaggtctcgca
gacaaaggatcagatcgtaagattgctcaaagtctgggaggattggggtttgttcgcccc
gcaatatcttcgcggtcttgaggctgcggtgatcattggcgtgagaagactcaggttgct
ctccaataagggcgacctgtctcgcgagcctgcttggttagagccgaaactggctgattg
gagacggcaacatttctcacagttggagaagatgtgccgcacccgtggcttgagatgctc
gactgcgcaccttgagcccaccaagcagcaaagcctcgaggaagcacgcaaggagtggct
gattgaccgcttggtcacctacgagctacttgcgtatgacaaggaacaggcaagactcca
gcaagcaaaggaggatgctgcaaacaagctttcgaggcggagaagcaagtatgcaatgga
tgacattgacggtgaggactgtggagatggctttccgatggatgagggtgagctggatgg
tgagccaatcgatctatccacgccaggggacatctacaacgcagtagaaatggccaagca
ggctccagaggcgttggcaagctaccttggcactgctagtgctggtgcagtgcttggcag
cgtgatgaactccagccctgcagcttccgcagcagaagaggttgtaagtgtcatcagctc
cgaggaagcagcagaggcagctgatgacaaggaaatgctggatgtccagcaaagttcagc
tcaagagacaacagaggcttcccagccagagttatccctttgtgtcgctttgggccgctc
tgtggtggccatgacaactgaagattcaaagcaacgtgctgcttacagcggccggcaaag
tacgtcaaccagaaatccgcacacagcctccaaagctgtagacgtcaaagcactggccaa
gcttagtatagaggacagggttttggcacagtggcgtgctgcttgtggctgccctatctc
tgatgaggcgaagacccaattccgcatagagtgcttggggaggaccttcaatttggcgga
tgtcaggctgtggcagaaccatgtgccggggaaaggcagccaggcttctatctacttgga
gttcttttttgatggctccccagatgaactcgaagatcaagaggaggcccgacaaagttg
gttgctctcacgtaaacgatggttgctgacaccgtagccatggtgctgatgtgacgctgc
tattgttcatgcctccaaagtacttgacgttgaggtggtttacttacgagcatcgctcca
aagcaaatgtgcattttcaggttcgggctcaagaccagtccgagcagaagcataaacatc
cgattaaacc

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (606)   
   KEGG ORTHOLOGY (1)   
   RefGene (604)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (615)   

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