KEGG   Breviolum minutum: v1.2.040904.t1
Entry
v1.2.040904.t1    CDS       T04349                                 
Symbol
symbB.v1.2.040904.t1
Name
(OIST) -
  KO
K12823  ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
Organism
smin  Breviolum minutum
Pathway
smin03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:smin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    v1.2.040904.t1 (symbB.v1.2.040904.t1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:smin03041]
    v1.2.040904.t1 (symbB.v1.2.040904.t1)
   03009 Ribosome biogenesis [BR:smin03009]
    v1.2.040904.t1 (symbB.v1.2.040904.t1)
Enzymes [BR:smin01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     v1.2.040904.t1 (symbB.v1.2.040904.t1)
Spliceosome [BR:smin03041]
 Complex A
  U1 snRNP components
   U1 related factors
    v1.2.040904.t1 (symbB.v1.2.040904.t1)
 Complex B
    v1.2.040904.t1 (symbB.v1.2.040904.t1)
Ribosome biogenesis [BR:smin03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    v1.2.040904.t1 (symbB.v1.2.040904.t1)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII Helicase_C_2
AA seq 296 aa
KLKRAGEVDTKRGPALLCITPTRELCHQIYSDTEKFGQPVQLTAACAYGGANRRDQEWAI
QQGPDCLIATPGRLNDFVQKKQVWLDQVRFAIIDEADRMLDMGFEPQIKQILDEVPWNER
QTCMFTATWPQECKKLAETYIRDPVQIQIGSGEITTNKNILQHVKMVDAETDKIEALKEI
LRGLPPLGNCLVFCNSKKKCGNVAWDLESDKELGMSAMELHGDLDQKQRDNALYKFKQGE
ARVLVATDLASRGLDVRNCAVVVNFDAPKSQEDYVHRIGRTGRADDSGEAYTLLPG
NT seq 889 nt   +upstreamnt  +downstreamnt
gaagctgaaacgtgctggagaggtggacacgaaacgagggcctgcgctcttgtgcatcac
tcccacacgagagttgtgtcaccagatctattcagacacggagaagtttggtcagccggt
ccagctgaccgcggcttgtgcctatggtggcgccaatcgccgagatcaagagtgggctat
ccagcaggggcctgactgtttgatcgcaacacccggacgtctcaacgactttgttcagaa
gaaacaagtttggctggatcaggtgaggtttgccattatcgatgaagcggatcgcatgct
cgacatgggtttcgaaccgcagatcaaacagatcctggatgaggtgccatggaatgagcg
gcaaacttgtatgttcacagcaacctggccgcaggagtgcaagaagttggcagagacata
catcagggatcctgtgcagatccagattggatcgggtgagatcaccaccaataagaatat
cctgcagcacgtcaagatggtggatgctgagactgataaaatcgaagcgctgaaggagat
cttgagaggtttgcctccattaggcaactgcttggtattttgcaactctaagaagaagtg
tggcaacgttgcatgggacctggagtctgacaaggaactagggatgtcggccatggagtt
gcacggcgatttggatcagaaacaaagagacaacgcactttacaagttcaagcagggcga
ggcccgtgtgcttgtggccacagacctggcatcgcgtggtttggatgtgcgaaactgcgc
tgtggtggtgaactttgatgcccccaagagtcaagaggactacgtgcaccgaattggacg
cacaggtcgcgctgacgactctggcgaagcttacaccttgctgcctggg

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (340)   
   KEGG ORTHOLOGY (1)   
   RefGene (338)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (350)   

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