KEGG T00718: Smlt2530

Stenotrophomonas maltophilia K279a: Smlt2530

Entry

Smlt2530 CDS T00718

Definition

DNA ligase family protein

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

sml Stenotrophomonas maltophilia K279a

Pathway

sml03410	Base excision repair
sml03420	Nucleotide excision repair
sml03430	Mismatch repair
sml03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:sml03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:sml03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:sml03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:sml03450]

SSDB

Motif

Pfam:

LigD_N DNA_ligase_A_M DNA_ligase_A_C DNA_primase_S

Other DBs

NCBI-GI:

190574460

NCBI-GeneID:

6393984

UniProt:

B2FSA7

Position

complement(2552181..2554730)

AA seq 849 aa
MSLVEYRRKRRFDQTREPEPGKALPEGQRAIFVVQLHHASRRHYDFRLQVGDALKSWAVP
KGPSYDPKVKRMAVEVEDHPVDYAAFEGEIPKGQYGGGHVAQFDHGVWATQGDPEAQLAK
GHLRFELFGAKLKGGWHLVRSGKPARQPQWLLFKDDDEFASDIEADDLLADVAVAPPEDL
KRAGAGKTAKKKLTVVSPTRTRRKNWAKKALALGKARRAAAPSGPFEPQLAKLGDAPPQG
GQWVHEIKWDGYRILATVAEGNVQLWSRNALEWTGKLPEIRDAIAALGLTSAALDGELIA
GAGTKEDFNLLQATLSGERQGVLTYALFDLLHLDGVDIADAPLLERKALLHSVLEGQGRP
LAFSSHVQGDGDEAYRLAGEQHFEGIISKRADRSYHSGRSEDWRKTKQLASDEFAVVGYT
APKGSRTGFGSLLLARPDPKHGWLYVGRVGSGFSDELIGEVSRRIEGGGGRKPTAHVPTQ
DTDLRAATWFAPRFVVEVFYRGIGGQKLLRQASLKAVRADKDIADLEDSDRAGKAPAAGG
THAPSRPGRRAKKPPATGRTPPALSSPGKILFPGDGYTKQEVWDYYAAVMEHLLPEVVDR
PLSIIRCPSGTAKPCFFQKHHTAGLELVDPVRLKEESGINAHYLVVRDAASLLELVQFNA
LEFHPWGSHAEAPDKADRVVFDLDPGPDVPFAEVKKAATDIRKLLAQLQLESFLRVSGGK
GLHVVVPLNPGCDWDLTKRFAKGFADALAQSEPQRFLATATKSLRNKRIFVDYLRNGRGA
TAVASYSLRARPGAPVALPIAWGDLAKLKRADAFTIKDVPAKLKRRRKDPWAGIGEVKQN
LARWAQADP

NT seq 2550 nt +upstreamnt +downstreamnt
atgtcactggtcgagtaccgccgcaagcgtcgttttgaccagaccagggagcccgaaccg
ggcaaggcgctgccagaaggccaacgcgccattttcgtggtgcagttgcatcatgccagc
cgcaggcactacgacttccgtctgcaggtgggtgacgcgctgaagagctgggccgttccc
aagggccccagttacgacccgaaggtcaagcgcatggcggtggaggtggaggatcatccc
gtcgactacgcagcatttgaaggcgagattcccaaaggccagtatggcggcggacatgtc
gcccagttcgaccacggtgtgtgggccacgcagggtgacccggaagcccagctcgccaag
ggccatctacgcttcgagctgttcggcgccaagctcaagggtggatggcatctggtccgt
tccggcaagcctgcgcgccagccacagtggctgctgttcaaggacgacgacgaatttgcc
agcgatatcgaggcagacgatctgctggcggatgtcgctgtagcgcccccggaggacctg
aagcgtgccggggccggaaagaccgcgaagaagaagctcacggtcgtatcccccacacgc
acccgacgaaagaactgggcgaagaaggccctggcgctcggcaaggcgagaagggcggcg
gcgccgtccgggccgtttgagccgcagttggccaagctgggcgacgcgccgccccagggc
gggcagtgggtgcatgagatcaaatgggatggataccgcatccttgctacggtggctgag
ggcaacgtgcagctgtggtcgcggaacgcactggaatggaccggcaagctgcctgaaata
cgtgacgcgatcgcggcactgggcctcacctcggcggcactggacggtgagctcatcgcc
ggcgccggcaccaaggaagacttcaacctgctgcaggccacgctctccggcgagcggcag
ggcgtcctgacgtatgcattgttcgatctgctgcatcttgatggcgtggacatcgccgat
gcgcccttgctggaacgcaaagccctgctgcactccgtgctggaggggcagggcaggcca
ttggcgttcagttcgcatgtgcagggggatggcgacgaggcctatcgcctggccggtgag
cagcacttcgaaggcatcatttccaagcgcgccgatcgcagctaccacagcggccgcagt
gaggattggcgaaagaccaaacagctggccagcgacgagttcgcggtggtcggatacacc
gcgccgaaaggcagccgcaccgggttcggctcgctgctgctggcgcggccagacccgaaa
catggctggctctacgtcggccgcgtcgggtccgggttctcggacgaactgatcggcgaa
gtcagcaggcgcatcgaaggcggcggcggccgcaagccgacggcgcacgtgcccacccag
gacaccgaccttcgcgccgcgacctggttcgcaccgcgtttcgtggtggaggtcttctat
cgcgggattggcgggcagaagctgttgcgccaggcatcgctgaaggcggtacgggcggac
aaggacatcgccgatctcgaagattccgatcgcgccggaaaggccccggctgcgggtggc
acgcatgcaccctcgcgacccgggcgcagggcgaaaaaaccacccgctaccggccgcaca
ccgcccgcgctttcgtcccccggcaagatcctgtttcctggcgatggctacaccaagcag
gaggtatgggactactacgcagcagtgatggagcacctcctgcccgaggtggttgatcgt
ccgctgtcgatcatccgatgccccagtggcaccgcaaagccctgcttcttccagaaacac
cacacagccgggctggaactggtcgatccggtaaggctgaaggaggaaagcggcatcaac
gcccattacctggtggtgcgtgacgcggccagcctgcttgaactggtgcagttcaacgcg
ttggagttccacccttggggcagccacgccgaagcgcccgacaaggccgaccgggtggtg
ttcgatctggatccaggaccggacgtaccctttgcagaggtcaagaaggcggcaaccgac
atccgcaaactgctcgcgcagctgcagttggaatcgttcctgcgtgtctccggcggcaag
ggcctgcacgtggtggtgccgctcaacccgggatgcgactgggacctgaccaagcgcttt
gcgaagggcttcgccgatgcgctggcgcaatccgagccccagcgattcctggcaacggcc
accaaaagcctccgcaacaagcggatcttcgtcgactacctgcgcaacgggcgcggtgcc
acggcagtcgcgtcctactcgctgcgggcgcggccgggcgcaccggtcgcgttgccgatc
gcctggggcgatctggcgaaactcaagcgcgcagacgcgttcacgatcaaggacgtgcca
gcaaagctcaagcggcggcgcaaagacccctgggccggcatcggggaagtgaaacagaat
ctggcgcgctgggcgcaggcagacccgtag

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

Download RDF

DBGET integrated database retrieval system