KEGG T00718: Smlt4667

Stenotrophomonas maltophilia K279a: Smlt4667

Entry

Smlt4667 CDS T00718

Gene name

recD

Definition

exonuclease V (EC:3.1.11.5)

Orthology

K03581

exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]

Organism

sml Stenotrophomonas maltophilia K279a

Pathway

sml03440

Homologous recombination

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:sml03440]

SSDB

Motif

Pfam:

AAA_30 UvrD_C_2 AAA_19 Viral_helicase1 AAA_11 Helicase_RecD AAA_22 UvrD-helicase AAA_16 DUF2075 AAA_28 AAA_25 PhoH Herpes_Helicase AAA_29 T2SE NTPase_1 AAA_18 AAA_17 SRP54 KaiC AAA UvrD_C

Other DBs

NCBI-GI:

190576449

NCBI-GeneID:

6391480

UniProt:

B2FP79

Position

complement(4815938..4817818)

AA seq 626 aa
MSLLKELHQKGLLRTLDHALATSLMRLRGDTPESVALAAALASLAVAQGHAGFDPAQPQR
LLEGVPEWPAAQDWLAQLRASPWVAIPEQADAIAEDAPLVLENGLLYLRRYREYERQLAA
GLQRIGRHPLPAPDMAALAPLFAQLFPQASGSEDHQARAAGVTLRHPLALVTGGPGTGKT
TTIARLLLLLAAQARHAGQPLPEVALAAPTGRAAERMAESLRLAVQRLQENGVDPALCAA
LPSTGTTLHRLLGVIPDSPRFRHHADNPLPVDVVVVDEASMIDLPMMAKLVDAIASGTRL
ILLGDPDQLPSVEAGDVLSAILRASGDGIGTRADDAQALQGLLAPATLQPQATPRAFAGR
RVQLQRGYRQSDALDLAPLAHAVREGDSGTALQLLRSGELAGVHFHEGEADPLRGQREHL
LGHWRALADAADPVLALQQAGRLRVLTALREGPQGARGLNSRIEQLLAGNTPGYFQGRLL
LVTENSYRHRLFNGDIGICLRDGSGAMVAWFPGDTVEQPRAFHPAALPAHESAFAMTVHK
AQGSEFDEVWLQLPRQDSRVLSRELVYTGLTRARQVLHVAGSAEVLQAALKRHASRLGGL
AWRLGTEAVAEAPVRIEQPTMQGQLF

NT seq 1881 nt +upstreamnt +downstreamnt
atgagcctgctgaaggaactgcaccagaagggcctgctgcgcaccctcgaccacgcgttg
gcgaccagcctgatgcggctgcgcggcgacacgccggagagcgtggcgctggcggcggcg
ctggcctcgctggcggtggcgcagggccacgccggcttcgatccggcgcagccgcagcgc
ctgctggaaggggtgcccgagtggcccgccgcgcaggactggctggcacaactgcgcgca
tcgccttgggtggctatacccgagcaggccgacgccatcgccgaggatgcgccgctggtg
ctggagaacggcctgctctacctgcgccgctaccgcgagtacgaacggcagctggccgcc
gggctgcagcgcatcggccggcatccgctgccggcaccggacatggcagcgctggcaccg
ttgttcgcgcagctgttcccgcaggcatcgggcagcgaggatcaccaggcccgtgccgcc
ggcgtgaccctgcgccatccgctggcgctggtgactggcggccccggcaccggcaagacc
accaccatcgcgcgcctgttgctgctgctggcggcgcaggcccggcacgccggccagccg
ctgcccgaagtggcgctggccgcgcctaccggacgcgccgccgagcgcatggccgagagc
ctgcgtctggccgtgcagcgcctgcaggagaacggcgtggacccggcgctgtgcgcggca
ttgcccagtaccggcaccaccctgcatcgcctgctcggcgtgatcccggattcgccgcgc
ttccgccaccacgccgacaacccgctgccggtggacgtggtggtggtcgacgaagcctcg
atgatcgatctgccgatgatggccaagctggtcgacgcgatcgccagcggcacccgcctg
atcctgcttggcgaccccgatcagttgccctcggtcgaagccggtgatgtgctcagcgcg
atcctgcgcgccagcggtgatggcatcggcacccgcgccgatgatgcgcaggcactgcag
ggtctgttggcaccggccacgttgcagccgcaggccacgccgcgcgccttcgccggccgc
cgcgtgcagctgcaacgtggttaccggcagagcgatgcgctggacctggcaccgctggcg
catgccgtgcgcgagggcgacagcggtaccgcgctgcagctgctgcgcagtggtgaactg
gccggcgtgcatttccacgaaggcgaagccgatccactgcgcggccagcgcgagcacctg
ctgggccattggcgtgcgttggccgacgccgccgatccggtgcttgccctgcagcaggcc
gggcgactgcgcgtgctgaccgcgctgcgcgaaggcccgcagggtgcgcgcgggctcaac
agccgcatcgaacagctgctggctggcaacaccccgggatacttccagggccgcctgctg
ctggtcaccgagaacagctaccggcaccgcctgttcaacggcgatatcggcatctgcctg
cgcgatggcagtggcgcgatggtggcctggttccccggcgacacggtcgagcagccgcgc
gccttccacccggccgcactgcccgcgcacgaaagcgccttcgcgatgaccgtgcacaag
gcgcagggctcggagttcgatgaagtgtggctgcagctgccgcgccaggacagccgcgtg
ctgtcgcgcgaactggtctacaccggcctgacccgcgcccgccaagtgctgcatgtggcg
ggcagcgcagaggtgctgcaggccgcattgaaacgccacgccagccgattgggtggcctg
gcctggcggctgggtacggaagcggtggccgaagcaccggtgcgcatcgaacagcccacg
atgcagggccagttgttctga

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (23)   
   Pfam (23)   
All databases (32)   

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