KEGG T01095: Smp

Schistosoma mansoni: Smp_005210

Entry

Smp_005210 CDS T01095

Gene name

SmHDAC1

Definition

histone deacetylase

Orthology

K06067

histone deacetylase 1/2 [EC:3.5.1.98]

Organism

smm Schistosoma mansoni

Pathway

smm04330

Notch signaling pathway

Class

Environmental Information Processing; Signal transduction; Notch signaling pathway [PATH:smm04330]

SSDB

Motif

Pfam:

Hist_deacetyl

Other DBs

NCBI-GI:

NCBI-GeneID:

GeneDB:

UniProt:

AA seq 469 aa
MEVYRPSKAYSEDMTRFHSDEYVKFLKNVRPDNMHEFNKQMQRFNVGEDCPVFDGLFEFC
QLSAGGSIAAAVKLNKQQTDIAINWGGGLHHAKKSEASGFCYINDIVIGILELLKYHQRV
LYVDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLKDIGAGRGKYYAVNCPLRD
GMDDDCYERIFKPVVTKVMETFRPGAVVLQCGADSLCGDRLGCFNLSLKGHGKCVEFIRS
FPLPLLLVGGGGYTIRNVARCWTNETSIALATEIPNDLPYNDYYEYFGPDFKLHISPSNM
ANQNTNEYLEHIKTKLFENLRMIPHCPSVQMQDIPDDIVDFDENDAVAKDLADPDKRISI
MAADKAIMPNNEFFDDPEEGSGLGGTTLRSGKSASRDVQNHRDQPKRARTDEDASSSTTK
PNSKEGSGSKKTDSTGDKRSESKNDFVEKMEVDLSKKANGLIEPERAAN

NT seq 1410 nt +upstreamnt +downstreamnt
atggaagtttataggccatctaaagcatacagcgaagatatgacaagatttcacagtgat
gaatatgtcaaatttttgaagaatgtaaggccagacaatatgcatgaattcaataaacaa
atgcaacgtttcaatgttggcgaagattgtcctgtcttcgatggacttttcgaattttgc
cagttatcggctggtggttctattgctgcagccgtcaaactgaataaacagcaaactgac
atcgccattaactggggtggtggcctccatcatgcaaagaaatctgaggcatcaggattc
tgctacatcaatgacattgtaatagggattttagaacttctgaaatatcaccaaagagtt
ctttatgtggatattgatattcatcatggtgatggtgttgaagaagctttctatactact
gatagagtgatgaccgttagtttccacaagtacggcgagtattttcccggaactggtgat
ctaaaagatattggtgcaggtcgcggtaaatattacgctgtcaattgtccactgagagac
gggatggatgatgattgctacgagcgtatttttaagcctgtcgtgacgaaagttatggaa
acttttcgacccggggccgttgtcttacagtgtggtgctgactcattatgtggtgatcga
cttggatgtttcaatcttagtctgaaaggccatggaaaatgcgtcgaatttatccgctca
tttcctttacctcttcttcttgtaggaggtggtggttatacaatccgaaatgttgctaga
tgctggactaatgaaacatccattgcccttgcaactgagatccccaatgatttaccctac
aatgattattatgagtatttcggccctgacttcaagctgcatataagtccgagcaacatg
gctaatcagaatactaatgaatatcttgagcatataaagacgaaactgtttgaaaatcta
cgaatgatacctcactgtcctagtgttcaaatgcaagatattccggatgacattgttgat
tttgacgaaaatgatgctgttgcaaaagatttagccgaccctgacaaaagaatttcaatt
atggctgctgataaagccatcatgcccaataacgagtttttcgacgatccagaagaaggt
tctgggcttggaggcaccactcttcgatcaggcaaatcagcttcacgagatgttcaaaat
caccgagaccaaccaaaacgcgcacgcacagatgaagatgccagttcatccaccacgaaa
ccaaacagtaaagaaggaagtgggtctaaaaagacagattctactggtgacaagcgttcg
gagtccaaaaacgattttgtagaaaaaatggaagttgatttatccaaaaaagccaacggt
ctaatagaaccggagcgagctgctaattaa

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   UniGene (1)   
   GENEDB-SMM (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

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