KEGG T01095: Smp

Schistosoma mansoni: Smp_058460

Entry

Smp_058460 CDS T01095

Definition

eukaryotic translation initiation factor 3 (eif3)-related

Orthology

K03253

translation initiation factor 3 subunit B

Organism

smm Schistosoma mansoni

Pathway

smm03013

RNA transport

Class

Genetic Information Processing; Translation; RNA transport [PATH:smm03013]

SSDB

Motif

Pfam:

eIF2A RRM_1 RRM_5 Nup35_RRM_2 RRM_6 YCII

Other DBs

NCBI-GI:

NCBI-GeneID:

GeneDB:

UniProt:

AA seq 671 aa
MPSFAGLDVDDEEIIPDILEQKPKVEDHLGSTVIVDGCPVVGPAKFELLKKFLLDKFSKI
GPIVDHEFPLDNEKQTKGYIFITYENGKAASQAVRTMNNVPLDKNHTFQVTLLSDFERVT
NVPTEWVPPPKQEYKDLGNLKSWLLNEFCRDQFAVVYNDGETGSVYWHTAVEPVVAEERA
HWTDGWMRWSPRGTYLATMHSLGVILWGGEKFQRIGRFPHSCVKTIEFSPLEQFMITLSP
SPNFPTDERADAIVWDVKRCVSRREFSVPIDFHPAFKWSPKDEYFACLRDGVISIYCASN
FRLLDKKKLGGNIRDFSWSPSDNILAYWVPESDNTPARVVLMEVPSRQELCTKNLFSVAE
ISLLWHEQGDFLAVQVLRCAKKKLDGEKQVKYVGTYTNFEIVRLREKLYPVDQLEVKGTV
SNFQWEPCGTRFAFLQSVTSGKLSIAIYDVSRGTNVREVTVLDLASPRTNDLRWSSKGGI
IVAAGLRSADGILEFISANDGQILAKGEHPTVSDIQWDPTGRYIATTVSSFYQKNDNAIW
FWNCVGRCLYKMNLRGIRTFTWRPRPPTLLSAEQLQAIKKNMSKYNSQLANEDRMLASKA
SRELLEKRQKLLTEFNIWKNAIIKLYNKDEEERFRLRGSGADTSTREPQTEEELEILISA
VHETIRKNTDD

NT seq 2016 nt +upstreamnt +downstreamnt
atgccgtcgtttgcaggcttggacgttgacgatgaggaaattattcctgatattctggaa
cagaaacccaaagttgaagaccacttgggttcaacagttatagtggatggatgtcctgtt
gttggcccagccaaattcgagctgcttaaaaagtttttgctagataaattttcgaaaatc
ggcccgatagtggatcatgaattccctctggataatgaaaaacaaacaaaagggtatatt
ttcattacctatgaaaacggaaaggcagcatcacaagctgttcgaaccatgaataatgtt
cctctggacaagaatcacactttccaggttactttattgtcagatttcgaacgtgtaaca
aatgttccaactgaatgggtacctccaccgaaacaagaatataaggatttaggtaatttg
aagagctggttgttgaatgagttttgtcgggaccagtttgctgttgtctacaatgatggt
gaaactggatctgtttactggcatactgctgtcgaaccagtcgtggctgaagaacgtgct
cattggactgatgggtggatgcgatggtcacccagagggacttatttggcaacaatgcat
tctttgggtgttattttatggggcggtgagaagttccaaagaatcggtcgttttccccat
tcatgtgtcaaaacaatcgagttttcacctttggaacaatttatgataaccttgagtcca
agccccaactttcccaccgatgaacgtgcagacgcaatcgtgtgggatgtgaagcgctgt
gttagtcgtcgagagttctccgttccaatcgattttcatccggccttcaagtggtcgcca
aaggatgaatattttgcatgcttgcgagacggtgtcattagtatttactgtgctagcaat
tttagacttttggataaaaagaaacttgggggcaatattcgcgatttttcttggtcacct
tctgataatattctagcctactgggtgcctgaatctgataatactccagccagagttgtt
cttatggaagtaccaagtcgccaggaactatgcacaaagaatttattttccgtagctgaa
atcagtcttctatggcatgaacaaggtgactttttagctgttcaagtattaaggtgtgca
aaaaagaagttggacggtgaaaagcaagtgaaatatgtgggtacctacaccaattttgaa
atagttcgtttaagagaaaaattatatcctgttgatcagctggaagttaaaggcactgtt
tcgaattttcaatgggaaccttgtggcacacgtttcgctttcttacaatctgtaacaagt
ggaaaattgtcaatcgccatttatgatgtatctcgtggaactaatgttcgtgaagttact
gttcttgatcttgcctcacctcgaaccaatgatcttcgttggtcatctaagggtggcatt
attgtagcagcaggtttaagaagtgctgatgggatactggaattcatttcagcaaatgat
ggtcagattttagctaagggagaacatccaactgttagtgatatacaatgggatcctaca
gggaggtatatagcgacaacagtaagtagtttctatcagaagaatgataatgcaatatgg
ttttggaattgtgtgggtcgttgcttgtataaaatgaacttgcgtggtattcgtactttc
acctggagaccacgaccacctacactactcagcgccgaacagcttcaggctattaaaaag
aatatgtcaaaatataattcacagttagccaacgaagatcgtatgcttgcttcaaaggct
agcagagaattacttgagaaacgacaaaaactattaactgaattcaatatttggaaaaat
gctatcattaaattatataataaagatgaagaagaacgctttagattaagaggttctggc
gctgatacatcaactcgtgagcctcaaacagaagaagaattggaaattttaatcagtgct
gtccatgaaacaattcgtaaaaatacagatgattaa

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   UniGene (1)   
   GENEDB-SMM (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

Download RDF

DBGET integrated database retrieval system