KEGG   Schistosoma mansoni: Smp_080530Help
Entry
Smp_080530        CDS       T01095                                 

Definition
(RefSeq) putative replication protein A
  KO
K10739  replication factor A2
Organism
smm  Schistosoma mansoni
Pathway
smm03030  DNA replication
smm03420  Nucleotide excision repair
smm03430  Mismatch repair
smm03440  Homologous recombination
smm03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:smm00001]
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    Smp_080530
   03420 Nucleotide excision repair
    Smp_080530
   03430 Mismatch repair
    Smp_080530
   03440 Homologous recombination
    Smp_080530
   03460 Fanconi anemia pathway
    Smp_080530
DNA replication proteins [BR:smm03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    Smp_080530
DNA repair and recombination proteins [BR:smm03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     Smp_080530
   MMR (mismatch exicision repair)
     Smp_080530
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     Smp_080530
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: RPA_C tRNA_anti-codon RMI2
Motif
Other DBs
NCBI-GeneID: 8342654
NCBI-ProteinID: XP_018654302
GeneDB: Smp_080530
UniProt: G4VRN3
Position
W
AA seq 264 aa AA seqDB search
MWSSTDYGSSIGTTSDFGGGYMASMGATTGQKKISYQGTIVPCTCAEIMAANQDGDKFVS
PCGIEFSQISVVGIIRSVNESSTRVEYEIDDYTGPCLPVKLFTEDQDNTSSGPQSRPFRE
LSYVRVHGHVRNFQGVKHVIAFRVIHLSDMNELTTHIMEVIYTRMLYTKIKQDENNGTNV
KSNFSEGGSHNAPGSISNGLTVLQNQILAIVRTFVGERGIPVSQLTEKLRGIPERQIRED
LDFLSAEGHVYSTVDDDHFRATEA
NT seq 795 nt NT seq  +upstreamnt  +downstreamnt
atgtggtcgtcaactgactacggtagtagtattggaactacaagtgattttggtggaggt
tatatggcatcgatgggtgccacaactggacaaaagaagattagttaccagggtactatt
gttccttgtacgtgtgccgaaataatggccgcaaatcaggatggtgataaatttgtgtct
ccatgtggaatagaattcagtcaaatatcagttgttgggattattcgttcggtaaatgag
tcaagtacacgcgtagagtatgagatcgacgactatacaggaccatgtttgccagtaaaa
ctttttacagaggatcaggacaatacatcttccggtccacaatcacgtccgtttcgcgag
ttatcgtatgtacgagtacatggtcatgtccggaacttccagggagtcaaacatgttatt
gctttccgagtcatccatttgtcagacatgaatgaacttactactcatataatggaagtg
atttatacaagaatgttgtatacgaaaatcaaacaagatgagaataatggcacgaacgtc
aaaagtaatttcagcgaggggggttcgcataatgcacctggttctataagtaatggactc
actgtcttgcaaaatcagatactcgcaatagttagaacgtttgttggtgagcgtggaatt
cctgtatcccaattaacggaaaagctgcgtgggatacccgaaaggcaaataagggaggac
ttggatttccttagtgctgagggtcatgtatattcgactgtggatgatgatcacttccga
gctactgaagcataa

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