KEGG T01095: Smp

Schistosoma mansoni: Smp_095370

Entry

Smp_095370 CDS T01095

Definition

DNA repair helicase rad3/xp-d

Orthology

K10844

DNA excision repair protein ERCC-2 [EC:3.6.4.12]

Organism

smm Schistosoma mansoni

Pathway

smm03022	Basal transcription factors
smm03420	Nucleotide excision repair

Class

Genetic Information Processing; Transcription; Basal transcription factors [PATH:smm03022]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:smm03420]

SSDB

Motif

Pfam:

DUF1227 DEAD_2 Helicase_C_2 ResIII

Other DBs

NCBI-GI:

256088634

NCBI-GeneID:

8341623

GeneDB:

Smp_095370

AA seq 764 aa
MIELKRTIDAKGHGVLEMPSGTGKTVSLLSLIVAYMKARPGIVEKFIYCSRTVPELEKVI
EELKVLDKYYATETNEKGCGLLGIVLSSRKNLCIQRDVKQAGDGAAVDSACFRLTASFVR
KKHMTDPNVPYCKYYEEFDLHGRDNPLPTGIYNMADIKTYAKKHNYCPYFLTRYAISYAN
IVVYSYFYLLDPKIANVVSRELPKNSVVVFDEAHNIDNVCIESMSCLITRRSLEKCTTSL
NLLTQTVNEAKTNNSERLKEEYQRLVEGLRQAKLSKETDLVLANPALPDDILQESIPGSL
RSADSFLSFLRRFLEYVKLRLRIAHVVHETPVAFLRDCLEKVCVDRKPLQFCAERLRSLL
HTLELADYANFSSLTLLCNFATLVSTYTRGFCLIIEPFDERTPTIINPVLYFHCMDASLP
IRPIMSRFTSVIITSGTLSPLEMYPRILDFHPVNTVSFTMTLARNCVLPMIVSKGNDQVP
MTTKFESRQDVAVIRNYGHLLAQLSAVVPDGIVAFFPSYHYLESTFASWYEQHIVEQIQR
NKLLFVETQDAEETSLALAAYHRACENGRGAVLLSVVRGRVSEGIDFDHHLGRCVIMFGV
PYVYTQSRIFKARLDFLREQYNVRPNEFITFDAMRHAAQCLGRAIRGKSDYGIMILADKR
YARADKRFKLPGWIQSQLQDAFINLSIEESIQASRRFLRLMGQPFNKNDQLGLALLTREH
INKLIEQNQKDSIISMGKMNSCQVANDLNPTNQSRTVTTAMTLK

NT seq 2295 nt +upstreamnt +downstreamnt
atgattgaattgaagcgtaccatagatgccaaaggtcatggtgttttagaaatgccatct
gggactggaaaaacagtttcattactctcattaattgttgcttatatgaaagctcgccct
ggaatagttgaaaaattcatttattgttcacgtacagtacctgaattagaaaaagtcatt
gaggaattaaaagttcttgataaatattatgcaacggaaactaatgaaaaaggatgtggt
cttttgggaattgttcttagttcacgtaaaaatttatgcattcaacgtgatgtaaaacag
gctggtgatggagctgctgttgattctgcttgttttcgactaaccgctagctttgtacgt
aaaaaacatatgactgacccaaatgttccgtactgtaaatattatgaggaattcgatctt
cacggtcgagacaatccgttgcccactggcatctacaatatggctgatatcaaaacatat
gccaaaaagcataactattgtccttacttccttacacgatatgctatttcctatgcgaat
atagtcgtctacagctacttttatcttcttgatccgaaaatagctaatgttgtctcacga
gaattaccaaagaattcagttgttgtttttgatgaagcgcataacatcgataatgtttgt
attgaatcaatgagttgtttaattacaagacgttctttagaaaaatgtacgactagttta
aatttattaacacaaactgttaatgaagctaagacaaataattcagaacgtttaaaagaa
gaatatcaacgtcttgttgaaggtttaagacaagcaaaattatcaaaagagacagattta
gtattagctaatccagctttaccagacgatatacttcaagaatcaataccaggatcactt
cgaagtgcagacagtttcttgtcgtttcttcgtcgatttttagaatatgtaaaattacgt
ttacgtatagctcatgtggttcatgagactccagtagcattcttacgtgattgtctagaa
aaggtttgtgttgatcgtaaaccactacaattctgtgcggaaagattacgttccttgctt
catactttagaattagcagattatgccaatttttctagtttaactttgttatgtaatttt
gcaacacttgtatctacatacactcgaggtttttgtctgatcattgaaccatttgatgaa
cgtacaccaactatcatcaatccagtattatattttcattgtatggatgccagtttaccg
atacgaccaattatgtcacgatttaccagtgtaattattacttccggtacactttcaccg
ctggaaatgtatccacgtatattagattttcatcctgtcaatacagtatcttttaccatg
acattagctcgtaattgtgttcttccaatgattgtatccaaaggtaacgatcaagttcca
atgacaacaaaatttgaaagtcgacaagatgttgccgttatacgtaattatggtcattta
ttagcacaattatctgctgttgttccagatggtattgtggcattttttccaagttatcat
tatcttgaatcaacatttgccagttggtatgaacaacatattgttgaacaaattcaaaga
aataagttgttatttgttgaaacacaagatgctgaagagacaagtttagcattagctgct
tatcatcgggcatgtgaaaatggacgtggagctgtattattatcagttgtacgtggtcga
gtatctgagggcatagattttgatcatcatcttggccgttgtgttatcatgtttggtgta
ccatatgtgtatacacagagtcgaatattcaaagctcgtttagattttcttcgtgaacaa
tacaatgttcgaccaaatgaatttattacattcgatgcaatgcgtcatgctgcacaatgt
ttaggacgagctattcgtggcaaatctgattatggtattatgattttagctgataaacgt
tatgctcgtgcagataaacgttttaaattacccggttggatacaatcacagctacaagat
gcatttattaatttatctatagaagaatcaatacaagcatcaagacgttttttacgttta
atgggtcaaccatttaataaaaatgatcaattaggtttagcattattaacacgtgaacat
attaataaattaattgaacaaaatcaaaaagattctataatatctatgggaaaaatgaat
agttgccaagtggcaaatgatttgaatcctacaaatcaatcaagaactgtaactacagca
atgacattgaaatga

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   UniGene (1)   
   GENEDB-SMM (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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