KEGG   Streptococcus macedonicus: SMA_0076
Entry
SMA_0076          CDS       T01674                                 
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
smn  Streptococcus macedonicus
Pathway
smn03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:smn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    SMA_0076 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:smn03021]
    SMA_0076 (rpoA)
   03400 DNA repair and recombination proteins [BR:smn03400]
    SMA_0076 (rpoA)
Enzymes [BR:smn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     SMA_0076 (rpoA)
Transcription machinery [BR:smn03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     SMA_0076 (rpoA)
DNA repair and recombination proteins [BR:smn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      SMA_0076 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L Mg_chelatase_C
Other DBs
NCBI-ProteinID: CCF01367
Position
69842..70780
AA seq 312 aa
MIEFEKPIITKIDENKDYGRFVIEPLERGYGTTLGNSLRRVLLSSLPGAAVTSIKIDGVL
HEFDTIPGVREDVMQIILNIKGLAVKSYVDDEKIIELDVEGPAEVTAGDILTDSDVEIVN
PDHYLFTIAEGHSLKATMTVAKERGYVSAEGNKKEDAPVGTLAVDSIYTPVKKVNYQVEP
ARVGSNDGFDKLTIEIMTNGTIIPEDALGLSARVLIEHLNLFTDLTEVAKSTDVMKETEK
VNDEKVLDRTIEDLDLSVRSYNCLKRAGINTVFDLTEKTEPEMMKVRNLGRKSLEEVKVK
LADLGLGLKNDK
NT seq 939 nt   +upstreamnt  +downstreamnt
atgattgagtttgaaaaaccaataataacaaaaattgatgaaaataaagattacggcaga
tttgtcattgaaccacttgaacgtggctatgggacaactctaggtaattctcttcgtcgt
gtactcttgtcttcactcccaggtgcggcagtaacatcaattaaaattgatggagtactc
cacgaatttgacactattccaggtgtacgcgaagatgttatgcaaatcatccttaatatt
aagggacttgcagtgaaatcttatgttgatgatgaaaaaattatcgaacttgatgttgaa
ggtccggcagaagttactgcgggagatattttaacagatagcgatgttgaaatcgtcaac
cccgaccactatctctttacaattgctgaaggacacagtttgaaagctacaatgactgtt
gctaaagaacgtggttatgtctcagcagaaggtaataaaaaagaagatgctccagtggga
acattggctgtagattcaatctacacaccagtgaaaaaagttaattatcaagttgaacct
gctcgtgtaggtagcaatgatggctttgataaattaacaatcgaaatcatgacaaatggc
acaatcattcctgaagatgctttaggtctttctgctcgtgtcttgattgaacacttgaac
ctctttactgaccttacagaagtggctaaaagcactgatgtaatgaaagaaactgagaaa
gtgaacgatgagaaagtgcttgaccgtaccatcgaagatcttgatttgtcagttcgctca
tacaactgtcttaaacgtgcaggtatcaatactgtatttgatttgacagaaaaaactgag
cccgaaatgatgaaagtccgtaaccttggtcgtaagagccttgaagaagtcaaagttaaa
cttgctgatcttggactcggactcaaaaatgataaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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