KEGG   Streptococcus macedonicus: SMA_1020
Entry
SMA_1020          CDS       T01674                                 
Symbol
topA
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
smn  Streptococcus macedonicus
Brite
KEGG Orthology (KO) [BR:smn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:smn03032]
    SMA_1020 (topA)
   03400 DNA repair and recombination proteins [BR:smn03400]
    SMA_1020 (topA)
Enzymes [BR:smn01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     SMA_1020 (topA)
DNA replication proteins [BR:smn03032]
 Prokaryotic type
  DNA Topoisomerases
   SMA_1020 (topA)
DNA repair and recombination proteins [BR:smn03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      SMA_1020 (topA)
SSDB
Motif
Pfam: Topoisom_bac zf-C4_Topoisom Toprim Toprim_4 DUF2996 HypA
Other DBs
NCBI-ProteinID: CCF02311
Position
complement(1003458..1005599)
AA seq 713 aa
MATTTTTKAQTAVKKSSKKTTKKKTAAKKNLVIVESPAKAKTIEKYLGRNYKVVASVGHI
RDLKKSSMSIDFENNYEPQYINIRGKGPLINNLKKEAKKSKKVYLASDPDREGEAISWHL
AHILDLDENDKNRVVFNEITKDAVKNAFIEPRQIDMNLVDAQQARRVLDRIVGYSISPLL
WKKVKKGLSAGRVQSVALKLIIDRENEIKAFKPEEYWTIDGFFKKGTKKFQASFYGIDGK
KLKLETNEDVQKVLALLTSDEFTVAKVEKKERRRNAPLPYTTSSLQQDAANKINFRTRKT
MMVAQQLYEGISLGKSGTQGLITYMRTDSTRISPIAQNDAANFITERFGEKYSKHGSRVK
NASGAQDAHEAIRPSNVNLTPESIAKHLDKDQLKLYTLIWNRFVASQMTAAVFDTMKVNL
EQNNVRFTANGSQVKFDGYLAVYNDSDKNKMLPNMVEGDIVKKVSTNPEQHFTQPPARYS
EATLIKTLEENGVGRPSTYAPTLDVIQRRYYVRLAAKRFEPTELGEIVNNLIVEFFPDIV
DVKFTADMEGKLDEVEEGKQQWQKVIDEFYKTFEKELAKAETEIEKIQIKDEPAGFDCDL
CGHPMVIKLGRYGKFYACSNFPECHNTKAITKEIGVTCPVCGKGQVIERKTKRNRIFYGC
DRYPECEFTSWDKPVGRSCPKSGDFLVEKKIRGGGKQVVCSNEECDYEEAKIK
NT seq 2142 nt   +upstreamnt  +downstreamnt
atggcaacgacgactactacgaaagcccaaacagctgttaaaaaatcaagtaaaaaaaca
acaaagaaaaaaacagctgccaagaaaaatttggttattgtggaatctccagctaaggca
aaaacaattgaaaaatatctcggacgtaattataaagttgtagcctcagtaggacatatc
cgcgatttgaaaaaatcaagcatgtctattgattttgaaaataattatgaaccacaatat
attaatattcgtggtaaaggtccactgattaacaaccttaaaaaagaagcgaaaaaatct
aaaaaagtttatcttgcaagtgacccggaccgtgaaggagaagcaatttcttggcactta
gctcatattttagatcttgatgagaatgacaaaaaccgtgttgttttcaacgaaattact
aaagacgctgtcaaaaatgcctttattgaaccacgccaaatcgatatgaatttagtcgac
gctcaacaagcgcgtcgagttcttgaccgtatcgtgggatattctatttctccgttgctt
tggaaaaaagttaaaaaaggtctttcagcagggcgtgttcagtccgttgcattaaaacta
attattgaccgtgaaaatgaaatcaaagcctttaaaccagaagaatactggacaattgac
ggtttctttaaaaaaggaacgaagaaattccaagcttcattctatggcattgatggcaaa
aaattaaaactcgaaacgaacgaagatgttcaaaaggttcttgccttattaactagtgac
gaatttaccgtagctaaggttgaaaagaaagaacgtcgtcgcaatgcaccacttccttat
acgacatcatctctccaacaagatgctgctaataaaatcaacttccgtacacgtaaaacc
atgatggttgcacagcaattgtacgaaggtatcagtcttggtaagagtggaacgcaaggt
ttgattacctacatgcgtactgactcaacacgtatcagcccaatcgcacaaaatgatgcc
gcaaactttatcacagaacgtttcggtgaaaaatactctaaacacggtagccgtgttaaa
aatgcttcaggagctcaagacgctcacgaagccattcgcccttcaaatgtcaatctaaca
ccagaatcaatcgctaagcacttagataaagaccaattaaaactttacacattgatctgg
aatcgttttgttgccagtcaaatgacagcagcagtctttgacacaatgaaagttaatttg
gagcaaaataacgtacgctttactgccaatggtagtcaagtaaaatttgacggttactta
gccgtatataacgattctgacaagaataagatgttgcctaacatggttgaaggtgatatt
gttaagaaagtgtcaacaaatcctgaacaacactttacgcaaccaccagctcgttattct
gaagcaacacttattaaaacattggaagaaaatggcgttgggcgtccgtcaacttatgcc
ccaacacttgacgttatccaaagacgttactatgttcgcttagctgcgaaacgttttgaa
cctacggaacttggtgaaatcgttaataatttgattgttgaattcttccctgatattgtt
gatgtcaaatttaccgctgatatggaaggtaaacttgatgaagtcgaagaaggcaaacag
caatggcaaaaagttatcgacgaattttacaaaacatttgaaaaagaacttgccaaagcc
gaaacagaaatcgaaaaaattcaaatcaaagatgaaccagctggctttgattgtgatctt
tgtggacacccaatggttatcaagttgggtcgttatggtaaattctacgcttgtagcaat
ttcccagagtgtcacaatacaaaagcaatcactaaagaaatcggcgtgacttgtccagtc
tgtggcaaaggtcaagtaattgagcgtaaaaccaaacgtaatcgtattttctatggttgt
gaccgttatcctgaatgtgaatttacatcatgggataaacctgtcggacgttcttgtcca
aaatctggagacttcttggttgagaagaaaatacgcggtggtggtaaacaagtcgtctgc
agtaatgaagaatgcgactacgaagaagcgaaaattaaataa

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