KEGG   Selaginella moellendorffii: SELMODRAFT_123271Help
Entry
SELMODRAFT_123271 CDS       T01496                                 

Definition
hypothetical protein
Orthology
K03144  
transcription initiation factor TFIIH subunit 4
Organism
smo  Selaginella moellendorffii
Pathway
Basal transcription factors
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:smo00001]
 Genetic Information Processing
  Transcription
   03022 Basal transcription factors
    SELMODRAFT_123271
  Replication and repair
   03420 Nucleotide excision repair
    SELMODRAFT_123271
Transcription machinery [BR:smo03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     SELMODRAFT_123271
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
Unknown
AA seq 459 aa AA seqDB search
MPNVRRATRDFMDLVASCLTAARIDALYASKWTCQAVLRSLPPLAKLYVLRLLYLDAAVP
DKMLLEWIKGDAVAKHKNAVDRLVQLRVFLPEEKILSRKKETHYRVNPKFQEQLRLALST
GLGTPRDPLPPDIAVRMPSAKELDDYATEKWEAWFSSLVNFASPDGPSASTNGFIVQLFQ
KADLLTSGQDPKITPAGFQFLLLDRNSQLWRVIREYVQYAEARQIDTGELIRFLLEIGFY
SVGEPYSMDSLPNSQRNFAEELAMLGVLQLQKGMKDRWFIPTRLATGLSASLSESSAWQT
EGFIMVETNFRVYAYTSSKLHIETLHVFVRTEYVLPNILVGSITKESVNGAFASGISADQ
IIKFLQQHAHPFVAQKVPSVPETVCDQIRLWESDRVRVQYLPAYCYEGFPSTSVYESVVA
HARDRNGLLWEDANRKMIVVGGEHHEAIRAFLQNINKKK
NT seq 1380 nt NT seq  +upstreamnt  +downstreamnt
atgccgaatgtgcggagggcgacgcgcgatttcatggatttggtcgcatcctgcctcacc
gccgccaggatcgacgcgctctacgccagcaaatggacttgccaggcggtcttgagatcg
ctgccgccattggcgaagctctacgtgttgcgattgctctacctggatgccgcggttccg
gacaagatgctgctggaatggatcaagggagacgctgttgccaagcacaaaaatgcggtg
gacaggctagtccagctcagagttttccttccagaagagaaaatcctttccaggaagaaa
gaaacacactacagagttaatcccaagttccaggagcaactacgactggcattgtctact
ggtttaggaactcccagggaccctttgcctccagacatcgctgtgaggatgccgtccgcg
aaggagctggacgactatgcgactgaaaaatgggaggcatggttttcaagcctcgtcaac
tttgcctctccggatggcccatccgcatcgaccaacggattcatcgtccagctcttccag
aaggccgatttgcttacttcaggccaggatcctaaaatcactccagctggctttcagttc
cttttgctggataggaactctcagctttggagagtgatccgagagtacgttcaatatgca
gaggctcgtcaaatagacactggagagctaatccgcttccttttggagattggattctac
agcgtcggcgagccatatagcatggattcacttccaaacagccaacgcaatttcgcggag
gagctcgcaatgctcggggtgttgcagctccaaaagggtatgaaagatcgatggttcatt
ccaacgagactcgctactggtctttcagcgagtttgtctgaatcatcagcatggcaaacg
gagggatttatcatggtggaaacgaacttcagagtctacgcgtacacgtcttcgaagctt
catatcgagacgctccatgtttttgtcaggaccgagtacgttcttccaaacattcttgtc
gggagcatcacaaaggagagtgtcaacggcgcgtttgcgagtggaatatctgcagaccag
attatcaaatttctccagcagcacgctcatccgtttgtagctcaaaaagttccttcggtt
ccagagactgtttgcgaccagattcgtctgtgggaatcggaccgcgtgagagtgcaatat
cttcccgcgtactgctacgaaggcttcccaagcacgtctgtttacgagtcagtggtggct
cacgccagggatcgaaatgggcttttgtgggaggacgctaacaggaaaatgatcgtcgtg
ggtggcgaacaccatgaagccattcgagccttccttcaaaacatcaacaagaaaaaataa

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