KEGG   Selaginella moellendorffii: SELMODRAFT_123370
Entry
SELMODRAFT_123370 CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K03267  peptide chain release factor subunit 3
Organism
smo  Selaginella moellendorffii
Pathway
smo03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:smo00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    SELMODRAFT_123370
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smo03019]
    SELMODRAFT_123370
   03012 Translation factors [BR:smo03012]
    SELMODRAFT_123370
Messenger RNA biogenesis [BR:smo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     SELMODRAFT_123370
Translation factors [BR:smo03012]
 Eukaryotic type
  Release factors
   SELMODRAFT_123370
SSDB
Motif
Pfam: GTP_EFTU GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 DUF3023 Gtr1_RagA Tub Peptidase_M35
Other DBs
NCBI-GeneID: 9639769
NCBI-ProteinID: XP_002986027
JGI: 123370
UniProt: D8SRU0
Position
Unknown
AA seq 472 aa
MDAEPAPSKEDFPEDVTDTRSHLNVVFIGHVDAGKSTIGGQILFVSGMVDERTIQKYERE
AKEKNRESWYMAYIMDTNEEERAKGKTVEVGRASFETAKTRFTILDAPGHKNYVPNMISG
ASQADIGVLVISARKGEFETGFERGGQTREHAQLAKTLGVAKLLVVVNKMDDSSVGWEKE
RFDEIEKKMTPFLKSCGYNIKKDVQFLPISGLYGTNLKERMPTSVCSWWEGPCLFEALDS
VEPPQRDATGPFRMPIIDRYKDMGTVVMGKIEAGSVRRGDNLVVMPNKAPVKVITIFRDA
DEVNQAKPGENLRIRLSGLEEDDISSGFVLSSSSSPIPAVLEFDAQLQVLELLDHKAIFT
AGYKAVLHIHAVVEECEIMELMQQIDPKTKKPMKKKVLFVKSGAVVVVRIQVPAPICIEK
FQDFPQMGRFTLRDEGACLSTSVTMLLLRFGVVLPIPGKTVAIGKVIKLRQE
NT seq 1419 nt   +upstreamnt  +downstreamnt
atggatgcggaaccagcaccaagcaaggaagattttcccgaagatgttactgacactcga
tcgcacttgaatgttgtgttcattggtcacgttgatgctggcaagtccacaatcggtgga
cagattctttttgtgagtggtatggtggacgaacgcaccatacagaaatacgagcgggaa
gccaaggagaagaatcgcgagagctggtacatggcctacattatggatactaacgaagaa
gagcgtgcgaagggaaagacggtggaagttggcagggcttccttcgaaacggctaaaacg
aggttcacgattctggatgctcccgggcacaaaaactatgtgccaaatatgatcagtggt
gcttcacaagcggacattggcgtgctggttatatccgctcgcaaaggtgaatttgaaacg
ggattcgaaagaggaggccagacacgggagcacgctcaacttgcgaagacactcggtgta
gcgaagctcttggttgttgtaaacaagatggacgattcttccgttgggtgggagaaggaa
aggtttgacgagattgagaagaagatgactccatttctgaagtcctgtggttataacatc
aagaaagatgtccaattccttccaatctcggggctttatggaacaaacctcaaagaaaga
atgccgacgtctgtatgctcttggtgggaaggaccttgtctgtttgaggcattagacagc
gtggagccgcctcaaagggacgctactggtccgttcaggatgccgatcatcgacagatac
aaggacatgggcacggtggtcatgggaaagatagaagcgggatccgtgaggcggggcgat
aatttagtggtcatgcccaacaaggctccagtgaaggttatcaccatcttccgtgacgct
gatgaagtcaatcaagccaaacccggagaaaatctaagaatacggctgtctggtcttgag
gaggatgacatttcatctggttttgtgctctccagcagcagcagcccaatccccgctgtg
ctggagttcgatgctcagcttcaagtgttggaacttctcgatcacaaggctatattcacg
gctggatataaggctgttctccacatccacgcggtcgtggaagaatgtgagatcatggag
ctcatgcaacagattgacccaaaaaccaagaagccaatgaagaaaaaagtgctctttgtc
aagagtggcgccgttgtcgttgtcaggattcaggttcctgctccaatctgcattgagaag
tttcaggactttccacagatgggccgtttcactttgcgtgacgaaggtgcttgtctctca
acttctgttactatgctactactgagatttggtgttgtgcttcccattccaggcaagact
gtcgccattggcaaggtcattaagctgaggcaggaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (95)   
   KEGG ORTHOLOGY (1)   
   RefGene (89)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (8)   
   Pfam (8)   
All databases (117)   

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