KEGG   Selaginella moellendorffii: SELMODRAFT_31574
Entry
SELMODRAFT_31574  CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K15865  threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:2.8.4.5]
Organism
smo  Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:smo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:smo03016]
    SELMODRAFT_31574
Enzymes [BR:smo01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.5  tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
     SELMODRAFT_31574
Transfer RNA biogenesis [BR:smo03016]
 Eukaryotic type
  tRNA modification factors
   Methylthiotransferase
    SELMODRAFT_31574
SSDB
Motif
Pfam: UPF0004 Radical_SAM TRAM TraT FAM219A
Other DBs
NCBI-GeneID: 9645738
NCBI-ProteinID: XP_002969909
JGI: 31574
UniProt: D8RF06
Position
Unknown
AA seq 421 aa
TIFLKTFGCAHNQSDSEYMAGQLLAYGYKISEDPDEADLWLINTCTVKAPSQSAMETLIR
KGKAQTIPLVIAGCVPQGSKDLKDLEGVSVVGVQQIQRVVEVVEETLKGHEVKLLRRSTL
PSLDLPKVRKNKFVEIIPINVGCLGSCTYCKTKHARGHLGSYKIEALVKRLQGVVSEGVT
EIWLSSEDTGAYGRDIGSDIPTLLRALVAELPRDRSVMLRIGMTNPPYILQHLKEIAEIL
RHPCVYSFLHVPVQSGSDSVLEAMKREYTVAEFKQVADTLIELVPDIHIATDIICGFPGE
TSDEFDKTMELIEHYKFPQVHISQFYPRPGTPAARMKRVPTAEVKKRSRLLTSLFESFTP
YSDMEGKVYRVWVTDTAADGIHLVGHTKSYVQVLLPSLPGLLGSNVNCKITSVGRWSVKA
E
NT seq 1263 nt   +upstreamnt  +downstreamnt
acaattttcctgaaaacatttggctgcgcacacaaccagagtgacagtgagtacatggcc
gggcaacttctcgcttacggctataagatatccgaagatcctgacgaggccgacctttgg
ctgatcaatacatgcacagtgaaggcacccagtcagtctgcaatggaaacactgatacgc
aaaggaaaggctcaaacgattcccttggtgattgccgggtgcgttcctcagggaagcaag
gatctgaaagacttggaaggcgtgagcgttgtaggagtgcagcaaatacagcgtgttgtg
gaggtggtggaagagactctcaaaggtcacgaagtcaagctgctcaggcggagtacactt
ccatcgcttgatttacccaaggtccgtaagaacaagtttgtggagattattccaatcaac
gtgggctgcctgggctcgtgtacgtattgcaagacgaaacacgcacggggtcatcttggc
agctataagatcgaggctctggtgaagaggctgcaaggggttgtgtccgagggtgtaaca
gagatttggctaagtagcgaggatactggagcttatgggcgtgatatagggagtgatatt
ccaacacttcttcgcgcgctagtggcagagcttcctcgagatagaagcgtgatgctgcgg
attggcatgacaaatccaccatatatactgcagcatctcaaggagattgctgaaattctt
cgtcacccttgcgtttattcgttccttcatgttcccgtgcagtccggaagcgactccgtc
ttggaggcaatgaagcgggagtacactgttgccgaattcaaacaagttgctgatactctc
atcgagctcgttcctgacattcatattgcgacggatataatatgcgggtttccaggagag
acgtccgacgagtttgacaagactatggagttgatagaacactacaagttcccgcaagtt
cacatatctcagttttatcctcggccagggactccagcggctcgaatgaagcgtgttcca
acagccgaagttaagaaaagaagccggctgctgacgagcttgtttgaatccttcacgccg
tattcggacatggagggcaaagtgtacagagtatgggtgaccgatacggcagcagacgga
atccacctcgttggtcatactaaaagctacgtgcaagtgctccttccgtctctccctggc
cttctgggctccaacgtcaactgcaagatcacgagtgtcgggaggtggtccgtgaaagct
gag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (37)   

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