KEGG   Selaginella moellendorffii: SELMODRAFT_415832
Entry
SELMODRAFT_415832 CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K10881  26 proteasome complex subunit DSS1
Organism
smo  Selaginella moellendorffii
Pathway
smo03050  Proteasome
smo03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:smo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    SELMODRAFT_415832
  09124 Replication and repair
   03440 Homologous recombination
    SELMODRAFT_415832
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smo03019]
    SELMODRAFT_415832
   04131 Membrane trafficking [BR:smo04131]
    SELMODRAFT_415832
   03051 Proteasome [BR:smo03051]
    SELMODRAFT_415832
   03400 DNA repair and recombination proteins [BR:smo03400]
    SELMODRAFT_415832
Messenger RNA biogenesis [BR:smo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX-2 complex
     SELMODRAFT_415832
Membrane trafficking [BR:smo04131]
 Exocytosis
  Tethering complex
   Exocyst complex assembly proteins
    SELMODRAFT_415832
Proteasome [BR:smo03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    non-ATPase subunits
     SELMODRAFT_415832
DNA repair and recombination proteins [BR:smo03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     SELMODRAFT_415832
SSDB
Motif
Pfam: DSS1_SEM1 YL1
Other DBs
NCBI-GeneID: 9630433
NCBI-ProteinID: XP_002975609
JGI: 415832
UniProt: D8RXD7
Position
Unknown
AA seq 112 aa
MATTATQDGAAATEEVKLDLFEDDDEFEEFENGEWDDKEEEDALQPWEDDWDDDDVNDDF
SQQLRAELEKNDSKCAHRDANSSKFGHKEALHHNQVLGGGAGEPSMSSQDWH
NT seq 339 nt   +upstreamnt  +downstreamnt
atggcaaccacggccacgcaagacggcgccgcggcgacggaggaggtgaagctcgatctc
tttgaggacgacgacgaattcgaggagtttgagaacggagaatgggacgacaaggaggag
gaggacgcgctccagccgtgggaggacgattgggacgacgacgacgtcaatgacgatttc
tcgcagcagcttagagcggagctagagaagaacgattctaagtgtgcacacagggacgcc
aattcttctaagtttggacacaaggaggctctccatcacaaccaagttcttggtggagga
gctggggaaccatctatgtctagccaggattggcattag

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (40)   
   KEGG ORTHOLOGY (1)   
   RefGene (34)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (51)   

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