KEGG   Selaginella moellendorffii: SELMODRAFT_431903
Entry
SELMODRAFT_431903 CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K14546  U3 small nucleolar RNA-associated protein 5
Organism
smo  Selaginella moellendorffii
Pathway
smo03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:smo00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    SELMODRAFT_431903
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:smo03009]
    SELMODRAFT_431903
Ribosome biogenesis [BR:smo03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    SELMODRAFT_431903
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 Utp12 PQQ_2 Cytochrom_D1
Other DBs
NCBI-GeneID: 9636568
NCBI-ProteinID: XP_002993948
JGI: 431903
UniProt: D8TEC1
Position
Unknown
AA seq 616 aa
MVLAAFSPRGDQFAIGAGDGRLKTWDVASGHVCAEFSGIAASSSQALDGHLALNYKTLAW
GVSSKKKKKKASLIVLGTGGGDVLAWDPILGELTWRTNDCNTGGVTSVCFAKNQGSLFSA
GIDGIVCELEVASGKILSTLQCSKSSITSISSSPDASLLLVAANELRLFDMRTRKRLRKF
TGHASSVNVTVFTEDGRYVLSAAVGERNIAVWDTNEVGKEAKVTLAMEHPAVALDSWGFE
KDCTERKILAVSETGEAYIWSGLSLEELGKAEPVRVRVGSKNSGKASKQSILLGRLVGAG
SVVVARGTTVRPSFETVALPEEGVIVLPPSEQGNLLLSQSEPTIKRGGDDAVTVLGADNA
ADASLPKPRIEAGDVKKRKRREANVASEAEPSQGSSYIFAALEDKADGATPMEEDKDEQT
MEERLMALGLVEDKRTEGNAFENAEVVPPKSDSLEVLFTQAMRSDDKSLIEQCLCVSDTK
VITNTVRSLSPKDACTLLRLAISRLEESLRETNMFQVVESRLHIFRPLLALSGRLDLIVA
KIKANETSKSVEQTEVATAVYEEDEEEDSDQEVEDAMADEEEDEDEEGEEERMDEDKPHL
ENGGSFSDDESDQSND
NT seq 1851 nt   +upstreamnt  +downstreamnt
atggttctagcggcgttcagtccgcgaggagatcagtttgctatcggcgctggcgatgga
cgattgaagacatgggatgttgccagtggtcatgtttgcgcggaatttagcgggatagca
gcgagttcttctcaagctcttgacgggcatttggctctcaactacaaaactctagcatgg
ggtgtttccagcaagaagaaaaagaagaaggcgtctttgattgttctaggaactggaggt
ggagacgtcctggcctgggatcccattctcggagagctcacatggaggacaaacgattgc
aacaccggtggagtaacctccgtgtgcttcgcgaagaaccaaggatctttgttcagtgct
gggatagatggcattgtctgcgagctcgaggtagcctctggaaagattttgagcacgttg
cagtgctcgaaaagttcaatcacgagtatatcgtcgtcgccagatgcttcgctgttgctt
gtcgcggccaacgagctgagactatttgatatgagaaccaggaagaggttacgaaagttt
actgggcatgcttcttctgtgaatgttactgtgtttaccgaggacggaagatacgtactt
tcggctgctgttggtgaaagaaacatcgcagtttgggacactaacgaagttgggaaggaa
gccaaagtgactctggcgatggagcatcccgctgttgctctagattcgtggggtttcgaa
aaggattgcacggaaaggaaaatactggcagtctcagaaacaggcgaggcttacatatgg
agcggtctgagcttggaagagctcgggaaggccgagcccgtgcgagttcgtgtcggctcc
aagaactcgggaaaagcgtcgaaacaaagcattcttcttggacggcttgtgggagctggc
tctgtcgtggttgcacggggtacgactgtgaggccgagttttgagacggtggcactgcct
gaagaaggcgtcattgttctgcctccatcggagcagggaaatctgttactctcgcagtcc
gaaccgacgatcaagcgtggtggcgatgatgcagtgactgtgttgggagcagacaatgca
gccgacgcaagccttcctaagcctcgaattgaagctggcgacgtgaagaaacgaaagagg
cgcgaagcaaatgtggcttcagaagccgaaccaagtcaaggaagttcatacatatttgcc
gctctagaggataaagccgatggagccactccaatggaagaagacaaggacgagcaaaca
atggaagaacgtctcatggctttgggactggtagaagacaaacgcaccgagggaaatgcg
tttgagaacgcggaagtggtgcctccaaagtcggattctctggaggttctcttcacgcag
gcaatgcgatcggacgacaagagtctgatcgagcagtgcctgtgtgtttcggatacgaag
gtgattacgaacaccgtcaggtccttgagtccaaaggatgcctgcactcttttgagactc
gcaatttcgaggcttgaagaaagcctgagagagacgaacatgttccaggttgtggagtct
cgtcttcacatattcagacctttgctcgcattgtctggaaggctggatctgatcgtggcc
aagatcaaggcaaacgagacatccaagagcgtcgagcaaacggaggtggctaccgctgtt
tacgaagaagatgaagaagaagacagtgatcaagaggtggaggacgcaatggctgacgaa
gaggaagacgaggacgaggaaggagaagaagaaagaatggacgaagacaagcctcacctg
gaaaacggtggaagcttttcggacgacgaaagtgaccaaagcaacgattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (5)   
   Pfam (5)   
All databases (32)   

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