KEGG   Selaginella moellendorffii: SELMODRAFT_446559
Entry
SELMODRAFT_446559 CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K15865  threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:2.8.4.5]
Organism
smo  Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:smo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:smo03016]
    SELMODRAFT_446559
Enzymes [BR:smo01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.5  tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
     SELMODRAFT_446559
Transfer RNA biogenesis [BR:smo03016]
 Eukaryotic type
  tRNA modification factors
   Methylthiotransferase
    SELMODRAFT_446559
SSDB
Motif
Pfam: Radical_SAM UPF0004
Other DBs
NCBI-GeneID: 9648692
NCBI-ProteinID: XP_002986199
JGI: 446559
UniProt: D8SSE5
Position
Unknown
AA seq 686 aa
MAISDSPQRADLWLINTCTVKAPTMGTLIRKGKAASIPLVDSWMRSSGFKRSRSCQRHRS
AVNTAGETLKGHEARLLRRDALPSLDLPKVRKNKFVEIIPINVGCLGACTYCKTKHARGH
LGSYTVDTPVQRLKTVVSEGRDIGANIPALLRALVAVLPHRQKYNAPNLHLTASGGNGCH
PCVYSFLHVLVQSGRDSVLEGMKREYTFSEFRKIVDTLTRLVPEIHIATDIICGFPGETS
EDFDRIMELIRECTFPQVHISQFYPRPGTPAALMKRVPTLEVKKRSRSLTSLFESFTPYA
GMEKTYRVWVTNTAADGIHLVGLCTSSTSSCTGPSWKQMVCDWRVANQIPLLETMLRKSD
ASSGSEAAGSVVTLVAFFTHSRRKQAQGRVCATLAQTRLGAIGSSNQSPISAIPDETVCG
RNSSAQVKPTYQDGWCISTARYCRLEALAFYISQTDTHFLSASLLPKLHSRLNLYDLEGR
YISWVKVCLHCSDLNYAVRRFNSSNAQPLSCQKFLSPSTWFLAMERKLLQQQQQPPMQAA
PATATARGLPTPAAAAAAAPAGQPAVPRPASSDRHSEHLGQHSPPKAPALWLVVAQPVST
ASRPAAAQQHHPEAATTKGSPKMLRGLLPAVESTRTTQTSPQSCYDPPESAVGDTIATAI
ANARLCFSSILSTVRSPDPTVHVVQA
NT seq 2061 nt   +upstreamnt  +downstreamnt
atggccatctcggactctcctcagagagctgatctttggctgatcaacacgtgtactgtg
aaagctccgacaatgggaacactgatacgtaaaggcaaagcagcctctattcccttggtg
gatagctggatgcgttcctcagggtttaaaagatctcgaagctgtcagcgtcatcggagt
gcagtaaatacagcgggggagactttgaaaggccacgaggcccggctgcttcgacgggat
gctttaccgtctcttgatttgccaaaagttcgtaagaacaagtttgtcgagatcattcct
atcaacgttggctgcttgggtgcttgcacatactgcaagacgaagcatgctcgcgggcat
cttggcagctacacagtagacacaccagtgcaaagattgaaaaccgtggtgtctgaagga
cgagacattggagcaaatataccagcgcttctacgtgctttagttgccgtgcttcctcat
agacagaagtacaatgctccgaatctacatcttacagcatctggaggaaatggctgtcac
ccctgcgtgtattcgttccttcatgttctggttcaatctggaagggactcggtgttggag
ggcatgaagagggagtacacgttttccgagtttagaaaaattgtggatactctcacaaga
ctagtcccagagattcatatcgctacagatattatctgtggatttccaggggaaacatca
gaggattttgacaggatcatggaactaatacgagagtgcacgttcccacaggtccacata
tcacagttttaccctcgaccaggaacaccggcggctctaatgaaacgggttccaacgctc
gaagtgaagaaacgaagccgttccttgacaagtctgttcgaatcgttcactccttacgca
ggaatggagaaaacgtaccgagtctgggtcaccaacactgctgctgatggaattcatctg
gttggcctgtgtacaagttctacttccagctgtaccgggccttcttggaagcaaatggtc
tgtgactggcgagtggcgaaccagattccactcctggagacgatgctgagaaagtcggat
gcgagcagcggatcagaagcggcaggctctgtggtcactcttgtggctttctttacacac
tccagaagaaaacaagctcaaggacgagtctgtgcaacgctcgcacaaactcgactgggc
gcaattgggagctccaaccagagtccaatctccgctatcccagatgagactgtctgtggg
agaaattcgtcggctcaggtcaagccaacttaccaagatggctggtgcataagcacagca
cgctactgtcgtctcgaagcactcgcgttttatatttcacaaacagatacacatttccta
tctgcctcacttctgccaaagcttcacagcagattgaatctgtacgacctggaaggtcgt
tatatctcatgggtgaaagtttgcctgcactgctcggaccttaattatgcagtccgacga
tttaacagctcaaacgctcagcctttgagttgccagaaatttctaagtcctagcacttgg
tttttggcaatggagaggaagctgctccagcagcagcagcagccgccgatgcaggcagcg
ccagccactgcaacagcccgcggcctgccaacaccagcagctgctgcggctgctgctcca
gccggccagccagccgtgccacggccggcctccagcgaccgccacagcgagcacttgggc
cagcactcgccgcccaaagcgccagccctgtggctcgtcgtggcccagcccgttagcact
gcgtcccggccagccgctgcccagcagcaccaccccgaggcagcaaccaccaagggatct
ccaaaaatgctaaggggattgctccctgctgttgagagcacccgcaccacccagacatca
ccacaaagctgctatgatccaccagaatctgccgtgggagacacaattgcaaccgcaatt
gcaaatgcccgcctctgcttctccagcatcctctccaccgtcagatctcccgatccaacg
gtccacgtggtccaagcctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (38)   

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