KEGG T01610: SMAC

Sordaria macrospora: SMAC_00152

Entry

SMAC_00152        CDS       T01610

Name

(RefSeq) uncharacterized protein

K13100

pre-mRNA-splicing factor CWC22

Organism

smp Sordaria macrospora

Brite

KEGG Orthology (KO) [BR:smp00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:smp03041]
    SMAC_00152
Spliceosome [BR:smp03041]
Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    SMAC_00152
Complex C
   U4/U6.U5 tri-SnRNP related factors
    SMAC_00152

SSDB

Motif

Pfam:

MA3 MIF4G

Other DBs

NCBI-GeneID:

10809204

NCBI-ProteinID:

XP_003351611

UniProt:

F7VKB0

Position

Unknown

AA seq 1004 aa
MASADNVSPSRSHPDDDDRSPSPRPQSPSPKDEDGSRSPGERTPSPPPRDPSLSRSEGER
TPSPSPRRDRSLSPRDRSLSRPRSRSPTPSSQSPPRRPVRSPSPRDSSPARRHDRSPSPR
ARSPPPRRHSRSPPPRRQSPPPRRRDAGDDYRLAKKERSPTPPPAPVKTEEEKLADARAE
YQKLLNLRSQGVYLPPHRLRALQAAITDKKTREYQRMAWEALKKSINGLVNKVNTANIKF
VVPELFGENLIRGRGLFCQSLLKAQHASLPFTPIYACLAAICNTKLPQVGELLVKRLILR
FRKAFKRNDKAVCLSSTMFIAHLVNNQVAHEMAAAQILLLLLAKPTDDSVEIAVGLMREV
GLFLEEMSPAIAHAVFDQFRNILHEADIDRRTQYMIEVLFQVRKDKYKDNPVIKEELDLV
EEEDQITHRIGLDDEIDPQDGLNVFKMDPNWEENEEEYKKLKAEILGEASDDEEGDSDDE
SESESESEDEEQKALEIKDQSNTDLVNLRRTIYLSIQSSADPEEAAHKLMKLRLPAGQEA
ELVSMIVESCAQEKVYLKFMGLLGERFARLNRMWMDLFEESFAKYYSTIHRYETNKLRNI
ARFFGHLLATDAIGWHVFSVIHLNEEETTSASRIFIKILFEDLQENIGSAKLKARMSEET
LQPSLQGIFPHDEPRNIRFSINYFTSIKMGYLTDEMRSFLANMPKPALPAPPADSDSESV
SSYSSYSSYSSRSRSRSRTPRKDTRGRSLSRTPPRRARGRSYSRSPSRSRSRSRSYSRSV
SRSIPRSPPPRRRAADSRSLSPPPRGRGRSYDRYSRSPSRSRSPTRSPAAAPIRRGRSGT
RSRSRSYSRSSSPPPARGYPTRGRPPVSNNDRAVAAAPSKRRREGSYSASRSPHPPPQQR
PRRGSYSRSRSRSPIPIRGNGPRGRDTGRGGPLPSRGGGRDRSYSRSRSRSPLPPASAEG
SRRAISRSPSPVVGNNKRRRSYSSSRSGSRSRSRSPVAKRGRVD

NT seq 3015 nt +upstreamnt +downstreamnt
atggcttcggcagacaacgtgtctccgtcgcgtagccatcccgacgacgatgaccgatct
ccgtctcctagaccccagtcaccttctcccaaggacgaagacggctctcgatcccccggt
gaacgcacaccctcacctcccccccgcgatccgtcactctctcgatcagaaggcgaacgc
acaccttcgccatctcctcgtcgtgatcgctcgctctccccaagagatcggtcgctctca
cgcccacgatcccgttcgcctacacccagtagccaatcgcctccccgacgccctgtccgc
tcgccatctccgagagatagctcaccggcgcgccgtcatgaccgatcaccctcccctcgg
gcacgttcgccgccgccacgccgccattcccgttctcctccgccgagacgacaatcccct
cctccgcgccgtcgcgatgccggtgacgactatagactggcaaagaaggagcgcagcccg
acaccaccccctgcgcccgtcaagaccgaggaagaaaagctggccgacgccagagcagag
taccagaagctcttgaacctacgcagtcagggtgtctacctaccgccgcacaggcttcgt
gccctccaggccgccatcaccgacaaaaagaccagagaataccagcgtatggcttgggag
gcactgaagaagtctatcaacggtctggtcaacaaggttaacactgccaacatcaagttt
gtagtccccgaactctttggcgagaacctcatccgtggccgcggtctgttttgccagagt
ctgctgaaggcccagcatgccagtttgcccttcacgcccatctatgcttgcttggctgcg
atttgcaacaccaagctgccccaggtcggcgaactgcttgtcaagaggctcatcctgcgt
ttccgcaaggcgttcaagagaaacgacaaggcagtttgcctctcgtcgaccatgttcatt
gcccatcttgtcaacaaccaggttgcccacgagatggctgctgcccagattttgctgctg
ctgcttgcgaagcctaccgacgacagtgtcgagatcgctgtcggcctcatgagggaggtc
ggcttgttcttggaggagatgtccccggccatcgcccatgccgttttcgaccagttccga
aacattctccacgaggctgatatcgaccgtcgtacgcagtacatgatcgaggtgctcttc
caggtgcgcaaggacaagtacaaggacaacccggttatcaaggaggagttggatctggtc
gaggaggaggatcaaatcacacaccggatcgggctcgacgacgaaattgacccgcaggat
ggattgaatgtgttcaagatggatcccaactgggaggagaatgaggaggaatacaagaag
ctgaaggcggagatcttgggcgaggccagcgacgacgaggagggcgattccgatgacgag
tcggaaagcgagtcagaatcggaggacgaggaacagaaggcgttggagatcaaggaccag
agcaatacagacctcgtcaacctcaggaggaccatctacctcagcatccagtcgagtgcc
gaccctgaagaagcggcacacaagctcatgaagctgcgcctccctgccggccaggaggcc
gagttggtgtcgatgattgttgaatcatgcgctcaggagaaggtctacctgaagttcatg
ggtttgctaggagagcggtttgcccgtctgaacaggatgtggatggatttattcgaggaa
tccttcgccaagtactactccacgattcatcgatacgagaccaacaagcttcgcaacatt
gctaggttctttggccatcttttggctaccgacgcgattggctggcacgttttctcggtt
attcacctaaacgaggaagaaacgacgtccgctagccgtatttttatcaagatcctgttt
gaagacctccaggagaatatcggctcggcaaagttgaaggctcgcatgagtgaagagacc
ctccagcccagtctgcaaggcatcttcccccacgacgaaccgcgcaacattcgcttctct
atcaactacttcacctccatcaagatgggttatctcaccgacgagatgcgcagtttcctg
gcaaacatgccaaaacccgccctgccagcgcccccagcggactccgattccgagtcggtg
tccagctactcttcctattcttcctactcatcccgttctcgctcccgctcacgaacgcct
cggaaggatacccgcgggcgttcgctttcgcgcactcctcctcgtcgtgccaggggcaga
tcctacagccggtcaccaagccggagcaggagtcgcagccgtagctacagccgctccgtc
tctaggtctatcccgcgttctcctcctccaaggcggagggcagcggactctcggtctctt
agcccgcctccccgcggccgtggtcgtagttacgaccgatactctcgctcaccctcgcgc
tcgcgctctcctacccgctccccagcggcggcacccatccgccgcggtcgttccggaacc
cgaagccgtagcagatcatactctcgctcgtcatcacccccgcctgctcgtggttatccc
acccgcggtcgcccccctgtcagcaacaacgacagagctgtcgccgccgctcccagcaag
cgtcgcagagaagggtcatactcggcaagccgctcgccacatcctcctcctcaacaacgt
cctcgtcgagggagttatagtcggtcgcgatcgagatctccgataccaatcagaggcaat
gggccgaggggtagggatacaggacggggtggcccactcccctctcgtggtggcgggcgg
gaccgctcatactcaagatcgcgaagccggtcacctttgccgccagccagtgccgagggg
tccaggagagctatcagcaggtcaccgagcccggttgtggggaacaataagcggaggaga
tcgtatagcagttctaggtcggggtctaggtcgagatctaggtcaccggtcgctaaacgg
ggaagagttgattag

All links

Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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