KEGG   Sordaria macrospora: SMAC_00733Help
Entry
SMAC_00733        CDS       T01610                                 

Definition
hypothetical protein
Orthology
K03144  
transcription initiation factor TFIIH subunit 4
Organism
smp  Sordaria macrospora
Pathway
Basal transcription factors
Nucleotide excision repair
Module
Holo-TFIIH complex
Brite
KEGG Orthology (KO) [BR:smp00001]
 Genetic Information Processing
  Transcription
   03022 Basal transcription factors
    SMAC_00733
  Replication and repair
   03420 Nucleotide excision repair
    SMAC_00733
Transcription machinery [BR:smp03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     SMAC_00733
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
AA seq 496 aa AA seqDB search
MSLGGQQLLEYLEKLPGTAFRRLYQSPATALAIFRRMLSHHAKVIVRGLLYMPDPFPLTS
LDIWFPPESGGKIHRDRTIAALRSLHVLQVSPPGKDRTQEIQITTSFKKGLQLAFEGGGE
DGSFGVPSSLPVDPTIDIGYLDKYARKKWDDILHYVVNSLGVQSSSEGVSGPKASVKELL
LAGRLVERRPDTRTGIGITQAGFTFLLQESNAQVWTLLLLWLEAADHAADSGMDSIDMLS
FLFMLSSLELGTAYDTSALTETRRNMLPSLVDFGLIYFPRDTRQFFPTRLATTLTSTASA
LRTVSSAFTAATANPSGEPGTTTSTSGGPAGATPADKTGTSKGIIIETNYRIYAYTTSPL
QIAVLALFCQLNMRFPNMVSAALRAIGFGITADQIISYLHAHAHQQMVREATVTGKTVLP
PTVVDQIRLWQLENERMQTTAGFLFKDFESTEEYAALSRYAEEIGVLVWKNDKRQLFFAS
KHEQLRDYLKSRKKGE
NT seq 1491 nt NT seq  +upstreamnt  +downstreamnt
atgtcactcggcggacaacagctcctggagtacctggagaagctgcctgggacagctttt
aggaggctataccagtcacccgcaacagctctggctatcttccgccgaatgctgtctcac
catgccaaggttattgtccgaggcctactctacatgccggacccgttccctctaacatcc
ctcgacatatggttccctccagagtccggtgggaagatacaccgcgatcgcaccatagcc
gctctacgatccctccacgtcctacaggtctcaccgccgggtaaggaccggacccaagaa
atccaaatcacaacaagcttcaagaagggcctacaactggccttcgaaggtggcggcgaa
gatggtagctttggtgttcccagttctctgcccgtcgatcccaccatcgatatcggctac
ctcgacaagtacgcccgcaagaagtgggacgacatcctccactatgtcgtcaacagtctc
ggagtccaaagcagttccgaaggggtgagcggtcccaaggccagcgttaaggaactgctc
ctggccggtcgcctcgtcgaacgccgtcccgacacccgaacaggcattggcattacgcaa
gctggtttcacattcctccttcaggagtccaacgcccaagtatggactttgcttctcctc
tggctcgaagcagctgaccacgcggccgactcgggcatggacagcatcgacatgctctct
ttcctcttcatgctatcctcgctcgagctcggcaccgcctacgacacctcagccctaacc
gaaacccggcggaatatgcttccctcgctcgtcgacttcgggctgatctacttcccgcgc
gacacgcggcagttcttccctacccgcctcgccacaaccctaaccagcaccgcctcggcc
ctgcgcaccgtctcctcggccttcaccgccgcgacagctaacccttccggcgaaccaggc
acgacgaccagcaccagcggcggtccggccggcgccacccccgccgataaaaccggcaca
tcaaagggcatcatcatcgagaccaattaccgcatctacgcttacaccacctcgcccctc
caaattgccgtcctggctctcttctgccagcttaacatgcgtttccccaacatggtctcg
gccgccttacgcgctatcggcttcggcatcacagccgaccagatcatttcctacctgcac
gcccatgcccatcagcagatggttagggaagccactgtgacgggcaagacggtgttgccg
ccgacggtggtggaccagatccgactttggcagctggagaatgagcggatgcagacgacg
gcgggattcctgttcaaggactttgagagcacggaggagtatgcggcgctgtcgagatac
gccgaggagattggcgtgctggtatggaagaatgataagcggcagctgttctttgctagt
aagcatgagcagttgagagattatttgaagagtcggaagaagggggagtag

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