KEGG T01610: SMAC

Sordaria macrospora: SMAC_03612

Entry

SMAC_03612 CDS T01610

Gene name

msh56

Definition

MSH6 protein

Orthology

K08737

DNA mismatch repair protein MSH6

Organism

smp Sordaria macrospora

Pathway

smp03430

Mismatch repair

Class

Genetic Information Processing; Replication and repair; Mismatch repair [PATH:smp03430]

SSDB

Motif

Pfam:

MutS_V MutS_III MutS_I MutS_II MutS_IV AAA_29 DUF1564 AAA_23

Other DBs

NCBI-GI:

336273106

NCBI-GeneID:

10808888

UniProt:

F7VVP0

AA seq 1230 aa
MGDKSSTPARTPARTPSTVKRSGLASTGRQSSILGFFSKTAVSATPTNATSNANSNANST
VTASSPASDATATPRPGQKEKSPECLKETTKSNSILPPRRRRGLDETPVPSSDAVLPPSS
QENPGTAYSKDDDTKTIMMPSKSSDDDGDDVFLSFSGRPKSSRQSRARSRPKVIDEDDED
DAFEMDETVVNEDEDDEMADFVVEDDESDEGASKSKKRKRPTARPSAPRKKSAMSSLPGP
RPSTRQEEDDEDEEMMDDVPRTSTALKWKYDPDNIQPAESRSVAPRTAPTSSSAKTKPKA
HTREPEQRYPWLADIQDANRNRPGHPDYDPGSVYVPPSAWRQFSPFETQYWEIKKNLWDT
VVFFKKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPESSLEMWVNQFVAKGYKVAR
VDQMESALGKEMRERDTKAKKADKIIRRELACILTGGTLVDGSMLQDDNAVYCAAIKESV
IDDKPAFGIAFVDAATGQFFISEFEDDVDLTKFETFVAQTSPRELILEKSHLSTKALRIL
KNNTAPTTIWNYLKMGTEFWEADTTRRELDCSGYFVSGEGQDEVWPEKLKEARGKDLLMS
ALGALTQYLRMLKIERNLLSQGNFAWYNPIHRNGTLILDGQSLINLEIFANTANGGPEGT
LFHLLNRCITPFGKRLFRQWVCHPLCNIQKLNERLDAVDMLNDDRSFQEQFSSQMSKMAD
LERLISRIHAGACKPGDFVKVLEGFERIDRTMELLEAFGGGNGLVDRLIASMPNLKEPLG
YWKTAFDRKRARDDKLLIPEQGIVEDFDRSQEELDRIKGELQELLERQKTALRCKTAKFT
DVGKEVYQIEVPKTVKVPPKWRQMSATSAVKRYYFKELEDLVRELQEAEETHSQIVKEVA
SKFFKRFDLDYETWLQAIRIISQLDCLISLAKASSALGQPCCRPVFVDDERTVVEFNELR
HPCMLNTVDDFIPNDIKLGGDEANIDLLTGANAAGKSTILRMSCIAVIMAQIGCYVPAMS
ARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDELGRGTSSYDG
VAVAQAVLHHVASHIGCVGFFATHYHSLATEFENHPEIRAKRMQIEVDEENKRITFLYKL
EDGVAEGSFGMHCAAMCGIPDKVIRRSEVAAKEWEHTSRLKESLDRAKTGCYIPLGVLSD
VASLLRSETGKEREVGDRGVEVLLRAIEAL

NT seq 3693 nt +upstreamnt +downstreamnt
atgggcgacaaatcttcaactccggcgcgcaccccggcaaggaccccatctaccgttaag
agatctggactggcctcgacgggcaggcagtcgagtattctcggattcttctccaagact
gccgtttctgcgactcctaccaatgcgacctcaaatgccaattccaatgccaatagcact
gtcacagcttccagtcctgcttctgatgccacagcaacacctcgccctggccaaaaggaa
aagtccccagaatgcctgaaagaaaccacaaaatccaactcgattctgccgcccagacgg
agaagggggcttgacgagaccccagtccctagtagtgacgccgttctaccccctagctcc
caggaaaacccaggcactgcctattccaaggatgacgacaccaagaccatcatgatgccc
agcaagtcgtcagacgacgacggcgacgatgtctttctctcattttcagggagaccaaag
agctctcgtcaatcacgcgctcgatcacgccccaaagtcatagacgaagacgacgaagac
gatgctttcgagatggatgagaccgtagtcaacgaggacgaagatgatgagatggcggac
tttgtagtcgaagacgacgaatccgatgaaggcgcctcaaagtccaaaaagagaaaacga
ccgacagcacgcccgagcgccccacgcaaaaagtcagccatgtcctctcttcctggtcct
cggccatcgacacgacaagaggaggatgacgaggacgaggagatgatggatgatgttccc
agaacctcaacagccctgaaatggaagtatgatccggacaacattcagccagctgagtct
cgatctgtcgctcctcgtaccgcaccaacatcgtcgtccgccaaaacaaagccaaaggca
cacacgagagagcctgagcagagatacccgtggctggccgatattcaagatgccaatagg
aaccggccaggacatccggattacgaccctggctccgtctatgtgcccccatctgcgtgg
aggcagttttcgccgttcgagacgcagtactgggagatcaagaagaacctatgggacacc
gtggtcttcttcaaaaagggcaagttctacgagctctatgagaacgatgccaccattggc
catcagctctttgacctcaagctcaccgatcgtgtcaacatgcgtatggttggtgttccc
gagagctcgctggaaatgtgggtcaatcagttcgtcgccaaagggtacaaggttgcccgc
gtcgaccaaatggagtctgccttgggcaaggagatgcgcgagcgtgacaccaaggccaaa
aaggcggacaagattattcgccgcgagctcgcttgcattctgacaggtggtactctggtg
gatggcagtatgcttcaagacgataacgccgtctattgtgcagccatcaaagagtctgtc
atcgacgataagcctgcatttggcatcgcctttgtagacgctgctactggacagttcttc
atctcagagtttgaggacgatgttgatcttaccaagtttgagacctttgtggctcagacc
tccccacgagagttgatcttggagaaatcacacctgtcgacaaaggccctacggattctc
aagaacaacactgctcctaccaccatctggaactatctgaaaatgggaaccgagttttgg
gaggctgacaccacaaggcgcgaacttgactgtagcggttactttgtctctggcgaaggc
caggatgaggtctggcccgagaaactcaaagaggcccgcggcaaagatctcttaatgtcc
gctctcggtgctctgacccagtatctgcgtatgctgaagattgagcgcaacttgctctcc
cagggcaactttgcctggtacaaccccattcaccggaacggcacacttattcttgacggc
cagtctcttatcaacctggaaatctttgccaatacagccaatggcggccccgagggaact
ttgttccatctgctaaacaggtgcataactcccttcggaaagcgactcttccggcaatgg
gtctgccatcctctctgcaacatacagaagctcaacgagagactggatgcggtcgacatg
cttaacgacgaccgaagctttcaagagcaattctcgtctcagatgagcaagatggccgat
ctggagcggttgatatcccgaattcatgctggcgcttgcaagcccggggactttgtcaaa
gttttggaagggtttgaacggattgaccgtaccatggaacttctcgaggcctttggtggt
ggtaatgggctggtcgaccgcctcattgcatccatgccgaacctcaaggaacccttgggg
tactggaagactgcgttcgataggaagagggcccgcgatgacaagcttcttattcctgaa
caaggcatagtagaagactttgaccgcagccaagaagaactggaccggatcaagggagag
ctgcaggagcttcttgagaggcaaaagactgctcttaggtgcaagaccgcaaagttcacc
gacgttggcaaagaagtctaccagattgaagttcccaagacagtgaaggttcctcccaaa
tggcgccaaatgtccgcaacttcggcggtcaagcggtactacttcaaggagctcgaggat
cttgttcgtgagcttcaggaagccgaagaaacacattctcagatcgtcaaggaagtcgct
tcgaaattcttcaagcgcttcgatctcgattatgagacatggttgcaggcaattcgcatc
atttcgcaactggattgtctcatcagtctggccaaagcgtcatcggctcttggtcaacct
tgctgccgcccagtgtttgtggatgatgagcggaccgttgtcgagttcaacgaactacgc
catccttgcatgctaaacaccgttgacgattttatcccgaatgacatcaagctgggtggt
gatgaggcaaacattgaccttcttaccggcgcaaatgcggctggcaagtccacaattctt
cgaatgtcctgcatcgctgtgattatggcccaaatcggttgttacgttcctgccatgtcc
gcccgcctgacacccgtcgaccgcattatgtctcgtttgggcgcgaatgacaacatcttt
gccgcgcaatccacattctttgtcgagctgtccgagacgaagaagatcctgtcagaagcc
actccccgttcactagttattcttgacgagcttggacgtggcacatcttcatatgacggt
gttgccgtcgcccaggcagttctgcaccacgtcgcatcacacattggttgcgtcggtttc
ttcgccacacactatcacagtcttgctaccgagttcgagaatcatcccgagatccgtgcc
aagagaatgcagattgaggtggacgaggagaacaagagaatcacctttctgtacaagctc
gaggacggcgtcgcagaaggctcattcggtatgcattgcgcagccatgtgtggtattccc
gacaaggtgattcgaagatccgaggttgcagcaaaggagtgggagcatacgagccgattg
aaggagagcctggacagagcaaagacgggctgctatattccgctcggagtgctgagcgat
gtggccagtctgctgaggagcgaaactgggaaggagcgggaagtcggcgacaggggcgtg
gaggttcttttgcgggctatcgaggctctttga

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

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