KEGG   Stenotrophomonas maltophilia R551-3: Smal_0045Help
Entry
Smal_0045         CDS       T00733                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
smt  Stenotrophomonas maltophilia R551-3
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:smt00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Smal_0045
Enzymes [BR:smt01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Smal_0045
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Smal_0045
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
52216..53028
Genome map
AA seq 270 aa AA seqDB search
MPELPEVETTRRGLAPHLQGRRVHGVILRRADLRWPIPPEVAGQLPGQRIDAVRRRAKYL
LLDTAAGSAVLHLGMSGSLRVLPGDTPLRAHDHVDISLDNGRLLRFNDPRRFGSLLWQPA
GEVHPLLQGLGPEPLDDAFDGNYLFARSRGRSAPVKTFLMDQAVVVGVGNIYAAESLFKA
GISPLREAGKISRERYQRLADAVKEILGYAITRGGTTLRDFISPDGAPGYFEQELLVYGR
DGLPCPNCGRALKHATIGQRASVWCSHCQR
NT seq 813 nt NT seq  +upstreamnt  +downstreamnt
atgcccgagctgcccgaagtcgaaaccacccgccgcggcctggcgccgcatctgcagggc
cgccgcgtgcacggggtgatcctgcgccgcgccgacctgcgctggcccatcccgccggag
gtggccgggcagttgccgggccagcgcatcgacgcggtgcgtcgccgtgccaagtacctg
ttgctggataccgccgcaggcagtgccgtgctgcacctgggcatgtccggcagcttgcgc
gtgctgccgggtgacacgccgttgcgcgcgcacgaccatgtggacatcagcctggacaac
ggccgcctgctgcgcttcaacgacccgcgccgctttggcagcctgctctggcagccggcc
ggcgaggtgcaccctctgctgcaggggctgggaccggaaccgctggacgacgccttcgac
ggcaactacctgttcgcccgcagccgtggccgcagcgcgccggtgaagaccttcctgatg
gaccaggcggtggtggtgggcgtgggcaacatctacgccgccgagagcctgttcaaggcc
ggcatcagtccgctgcgcgaggcaggaaagatctcgcgcgaacgctaccagcggctggcc
gacgcggtgaaggaaatcctcggctacgccatcacccgtggcggcaccaccctgcgcgat
ttcatcagccctgacggcgcaccgggctacttcgaacaggaactgctggtgtacggccgc
gacgggctgccctgcccgaactgtggccgcgcgctgaagcacgccaccatcggccagcgc
gccagcgtctggtgcagccactgccagcgctga

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