KEGG   Stenotrophomonas maltophilia R551-3: Smal_3947
Entry
Smal_3947         CDS       T00733                                 
Name
(GenBank) DNA helicase II
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
smt  Stenotrophomonas maltophilia R551-3
Pathway
smt03420  Nucleotide excision repair
smt03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:smt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Smal_3947
   03430 Mismatch repair
    Smal_3947
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:smt03400]
    Smal_3947
Enzymes [BR:smt01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Smal_3947
DNA repair and recombination proteins [BR:smt03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Smal_3947
   MMR (mismatch excision repair)
    Other MMR factors
     Smal_3947
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PcrA_UvrD_tudor AAA_30 Viral_helicase1
Other DBs
NCBI-ProteinID: ACF53646
UniProt: B4SNM6
Position
complement(4441475..4443667)
AA seq 730 aa
MDVSHLLDGLNPAQREAVSAPPGHHLVLAGAGSGKTRVLTHRIAWLHEVDGVPTHGIFAV
TFTNKAAGEMRHRIDAQLPNGSRGMWIGTFHGLANRLLRLHWQDAKLPEGFQVMDSDDQL
RLVKRVVQALELDDGKYPAKQIAWWINAQKDEGRRPQHIQPEPHDAWLETMRQAYIEYQA
RCDRAGLVDFAELLLRAHELLRDNPALLSHYRARFREILVDEFQDTNAIQYAFVRVLAGD
SGHVFVVGDDDQAIYGWRGAKVENVQGFLRDFPGAQTIRLEQNYRSTANILGAANAVIAH
NPDRIGKELWTDSGDGEPIDLYAAYNEMDEARYIVERARQWVRDGGSYTEVAVLYRSNAQ
SRALEEALLSEQVPYRVYGGMRFFERAEIKDALAYLRLLSNRNDDAAFERAVNTPTRGIG
DRTLDEVRREARAQGISLWEATMLVTQGSALAARARNALAGFLVLVNELQAQTLHMTLAE
RVDHVLARSQLREHWSKESRNALDSESRTDNLDELVSVASRFVRRADDIEEVGEDMDELV
AFLAYAALEAGEGQAQAGEEGVQLMTLHSAKGLEFPLVFLAGLEEGLFPSARSLEESGRL
EEERRLAYVGITRARQKLVLSYAESRRIHGQDNYSLPSRFLREIPRELLHEVRPKVQVSR
PASMGASRVMGHASIEAPPLKLGALVTHPKFGEGMVTDYEGNGAHARVQVEFADAGSKWL
VMAYANLTVI
NT seq 2193 nt   +upstreamnt  +downstreamnt
atggatgtctcccacctgcttgatggcctgaacccggcccagcgcgaagccgtctccgct
ccccccggccaccacctggtgctggccggtgccggttccggcaagacccgcgtactcacc
caccgcatcgcctggctgcatgaagtcgatggcgtgccgacccacggcattttcgcggtg
accttcaccaacaaggcggccggcgaaatgcgccaccgcatcgacgcacagctgcccaat
ggcagccgcggcatgtggatcggcaccttccatggcctggccaaccgcctgctgcgcctg
cactggcaggacgcgaagctgcccgaaggcttccaggtcatggattcggacgaccagctg
cgactggtcaagcgcgtggtgcaggcgctggaactggatgacggcaagtacccggccaag
cagatcgcgtggtggatcaacgcgcagaaggacgagggccgccgcccacagcacatccag
cccgaaccgcacgacgcgtggctggaaaccatgcgccaggcctacatcgagtaccaggca
cgctgcgaccgcgccggcctggtcgacttcgccgagctgctgctgcgcgcgcatgagctg
ctgcgcgacaacccggcgttgctgtcgcactaccgcgcgcgcttccgcgagatcctggta
gacgagttccaggacaccaatgccatccagtacgccttcgtgcgcgtgctggccggcgat
tccggccacgtgttcgtggtcggtgacgatgaccaggccatctacggctggcgcggtgcc
aaggtcgagaacgtgcagggcttcctgcgcgacttcccgggcgcgcagaccatccgcctg
gaacagaactaccgctccaccgccaacatcctcggtgccgccaacgcggtgatcgcgcac
aacccggatcgcatcggcaaggaactgtggaccgacagcggcgacggcgagccgatcgac
ctgtatgccgcctacaacgagatggacgaagcgcgctacatcgtcgagcgtgcccgccag
tgggtgcgcgacggtggcagctacaccgaagtggccgtgctctaccgcagcaacgcgcag
tcgcgcgcgctggaagaagcactgctgagcgagcaggtgccgtaccgcgtgtatggcggc
atgcgcttcttcgaacgtgccgaaatcaaggacgcgctggcctacctgcgcctgctgtcc
aaccgcaacgatgacgcggcgttcgagcgcgcggtcaacacgccgacgcgtggcatcggc
gaccgcacgctggacgaagtgcgccgcgaagcgcgcgcgcagggtatttcgctgtgggaa
gcgaccatgctggtcacccagggcagcgcgctggccgcacgtgcgcgcaatgcgctggcc
ggcttcctggtgctggtcaacgagctgcaggcgcagactctgcacatgaccctggccgag
cgcgtggaccacgtgctggcgcgctcgcagctgcgcgagcactggagcaaggaaagccgc
aacgcgctcgattcggaatcgcgcaccgacaacctcgacgaactggtctcggtggcctct
cgcttcgtgcgccgcgccgacgacatcgaggaagtgggcgaggacatggacgagctggtc
gcattcctggcctatgccgcgctggaggccggcgagggccaggcgcaggcgggcgaggaa
ggcgtgcagctgatgaccctgcactcggccaagggcctggaattcccgctggtgttcctg
gccggcctggaagaaggcttgttccccagcgcacgttcgctggaggaaagcgggcggctg
gaagaagagcgccgcctggcctacgtgggcatcacccgcgcacgccagaaactggtgctg
agctacgccgaatcgcgccgcatccatggccaggacaactacagcctgccgtcgcgcttc
ctgcgcgagattccgcgcgagctgctgcacgaagtgcgcccgaaggtgcaggtctcgcgg
ccggcctcgatgggcgccagccgggtgatgggccatgcctcgatcgaggcaccgccgctg
aagctcggcgcactggtcacccatcccaagttcggcgaaggcatggtgaccgactacgaa
ggcaacggtgcccacgcccgcgtgcaggtcgagttcgccgatgccggcagcaagtggctg
gtgatggcgtatgccaacctgacggtgatctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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