KEGG T00733: Smal

Stenotrophomonas maltophilia R551-3: Smal_4013

Entry

Smal_4013 CDS T00733

Definition

exodeoxyribonuclease V subunit alpha (EC:3.1.11.5)

Orthology

K03581

exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]

Organism

smt Stenotrophomonas maltophilia R551-3

Pathway

smt03440

Homologous recombination

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:smt03440]

SSDB

Motif

Pfam:

AAA_30 UvrD_C_2 AAA_19 Viral_helicase1 AAA_11 Helicase_RecD AAA_22 UvrD-helicase AAA_16 DUF2075 AAA_28 AAA_25 PhoH Herpes_Helicase AAA_29 T2SE KaiC NTPase_1 AAA_18 AAA_10 AAA_17 SRP54 UvrD_C

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(4535576..4537456)

AA seq 626 aa
MSLLKELHQKGLLRTLDHALATSLQRLRDDTPESVALAAALASLAVSQGHAAFDPAQPQR
LLEGVPEWPAAQDWLEQLCASPWVATPEQADAIAEDAPLVLENGLLYLRRYREYERQLAA
GLQRIGRHPLPAPDMAALAPLFAQLFPQALGGEDHQARAAGVTLRHPLALVTGGPGTGKT
TTIARLLLLLAAQARHAGQPLPEVALAAPTGRAAERMAESLRVAVQRLQEQGLDPALCAA
LPSTGTTLHRLLGVIPDSPRFRHHADNPLPVDVVVVDEASMIDLPMMAKLVDAIASGTRL
ILLGDPDQLPSVEAGDVLSAILRASGDGIGTRADDAQALHGLLAPAILQPQAAPRAFAGR
RVQLQRGYRQSDALDLAPLAHAVREGDSSTALQLLRSGELAGVHFHEGEADPLRGQREHL
LGHWRALADAADPVLALQQAGRLRVLTALREGPQGARGLNSRIEQLLAGNTPGYFQGRLL
LVTENSYRHRLFNGDIGICLRDGSGAMVAWFPGDSVDQPRAFHPAALPAHESAFAMTVHK
AQGSEFDEVWLQLPRQDSRVLSRELVYTGLTRARQVLHVAGSADVLQAALKRHASRLGGL
AWRLGAEEVAEAPARIEQPTVQGQLF

NT seq 1881 nt +upstreamnt +downstreamnt
atgagcctgctgaaggaactgcaccagaagggcctgctgcgcaccctcgaccatgcacta
gcgaccagcctgcagcggctgcgcgacgacacgcccgagagcgtggcgctggcggctgcg
cttgcgtcgctggcggtatcgcaaggccatgctgcgttcgatccggcgcaaccgcagcgg
ttgctggaaggcgtacccgagtggcctgccgcgcaggactggctggagcagctgtgcgca
tcgccgtgggtcgcgacgccggagcaggccgacgccatcgccgaggatgcgccgctggtg
ttggagaacggcctgctctacctgcgccgctatcgcgagtacgagcgtcagctggcggct
gggctgcagcgcatcggccggcatccgctgccggcgccggacatggcagcgttggcgcct
ttgttcgcgcagctgttcccgcaggcactgggcggcgaagatcatcaggcacgcgccgcc
ggcgtgaccctgcgccatccgctggcgctggtcaccggcggccccggcaccggcaagacc
accaccatcgcgcgcctgttgctgctgctggccgcgcaggcccggcacgccggccagccg
ctgcccgaggtggcgctggccgcgcccaccgggcgtgccgccgagcgcatggccgagagc
cttcgcgtcgccgtgcaacggctgcaggaacaaggactggacccggcgttgtgcgcggcg
ctgcccagtaccggcaccaccctgcatcgcctgctcggcgtgattcccgattcaccgcgc
ttccgccaccatgccgacaatccgctgccggtggatgtggtggtggtcgacgaagcctcg
atgatcgatctgccgatgatggccaagctggtcgacgcgatcgccagcggcacccggttg
atcctgctcggcgatcccgatcagttgccctcggtcgaggccggcgacgtgctcagcgcg
atcctgcgtgccagcggtgatggcatcggtacccgcgctgatgacgcgcaggcactgcat
ggtcttctggcgccggccatcttgcagccgcaggccgcaccacgcgccttcgccgggcgc
cgcgtgcagctgcagcgcggctaccggcagagcgatgcgctggatctggcaccgctggcc
cacgccgtgcgcgagggcgacagcagcacagcattgcagctgctgcgcagcggtgaactg
gccggcgtgcatttccacgaaggcgaggccgatccgctgcgtggccagcgcgagcacctg
ctgggccactggcgagcactggccgacgcggctgatccagtgcttgccctgcagcaggcc
gggcgcctgcgtgtgctgaccgccttgcgcgaaggcccgcagggcgcacgcgggctcaac
agccgcatcgaacagctgctggccggcaacacccccggctacttccagggtcgcctgctg
ctggtcaccgagaacagctaccggcatcgcctgttcaacggcgatatcggcatctgcctg
cgtgatggcagcggcgcgatggtggcctggttccccggcgacagcgtcgaccagccgcgc
gccttccacccggccgcactgcccgcgcatgaaagcgccttcgcgatgaccgtgcacaag
gcgcagggttcggagttcgacgaagtgtggttgcagctcccacgccaggacagccgcgtg
ctgtcgcgcgaactggtctacaccggcctgacccgcgcccgccaggtgctgcatgtggcc
ggcagcgccgatgtgctgcaggccgcattgaagcgccacgccagccgattgggtggtctg
gcctggcggctgggtgcggaagaggtggctgaagcaccggcgcgcatcgaacagcccacc
gtgcagggccagctgttctga

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-SMT (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (23)   
   Pfam (23)   
All databases (33)   

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