KEGG   Serratia marcescens WW4: SMWW4_v1c21260
Entry
SMWW4_v1c21260    CDS       T02448                                 
Symbol
rsmF
Name
(GenBank) 16S rRNA m(5)C1407 methyltransferase, SAM-dependent
  KO
K11392  16S rRNA (cytosine1407-C5)-methyltransferase [EC:2.1.1.178]
Organism
smw  Serratia marcescens WW4
Brite
KEGG Orthology (KO) [BR:smw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:smw03009]
    SMWW4_v1c21260 (rsmF)
Enzymes [BR:smw01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.178  16S rRNA (cytosine1407-C5)-methyltransferase
     SMWW4_v1c21260 (rsmF)
Ribosome biogenesis [BR:smw03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    SMWW4_v1c21260 (rsmF)
SSDB
Motif
Pfam: Methyltr_RsmB-F YebU_pre-PUA_dom Methyltr_RsmF_N Methyltranf_PUA Methyltransf_31 PCMT Methyltransf_25 Methyltransf_23 TruB-C_2 Rap1_C Ubie_methyltran
Other DBs
NCBI-ProteinID: AGE17927
Position
complement(2299275..2300786)
AA seq 503 aa
MPGPVFFRFVINSRPCLYCTLRVRPVAKSTAVFLPPAFLDATRAIMPAELAMEDFIAACQ
RPLRRSLRVNTLKISVADFLVLVQDYDWRLEPIPWCAEGFWIERDDEELRLGSAAEHLSG
LFYIQEASSMLPVSALFAGDAAPNRVLDVAAAPGSKTTQIAALMGNQGGIVANEYSASRV
KVLHANISRCGVKNTALTHFDGRVFGAALPESFDAILLDAPCSGEGVVRKDPDAMSNWSP
ESVTEIAATQRELIDSAFHALAPGGVMVYSTCTLNAQENQQVVRWLLDTYGDAVSVEPLG
ELFPGADKALTAEGFLHVFPQIYDSEGFFVARLRKQHAVAPLPKPTYKVGKFPFSPLSGK
EATLVAQAAAASGLTWGDDSRLWERDKEIWLFPAELEPLFGKVRFSRIGLKLAERFPKGF
RWQHEAAIALAGAGGKQHFELDAALAQEWYHGRDLYPEQPPAGDECIVTYQGQPLGIAKR
IGSRIKNNLPRELVRDGALDFHL
NT seq 1512 nt   +upstreamnt  +downstreamnt
atgccgggccctgtttttttccgctttgtgataaactctcgcccttgtctttattgcacc
ctgagagttcgccccgtggccaaatccaccgccgtttttctgccccccgctttcctcgac
gccacccgcgccatcatgcccgccgagctggcgatggaagattttatcgccgcctgtcag
cgcccgctgcgccgcagcctgcgcgtcaacacgctgaaaatcagcgtcgccgacttcctg
gtgctggtgcaggattacgactggcgactggagcccattccctggtgcgcggaagggttc
tggatcgaacgcgacgatgaagagctgcgattaggcagcgccgccgaacatttgagcggc
ctgttctacattcaggaggccagttcgatgttgccggtcagcgcgctgttcgccggcgac
gcggcgccgaatcgcgtgctggacgtggcggcggcgccgggatccaaaaccacccagatc
gccgcgttgatgggcaaccagggaggcatcgtcgccaacgaatactccgccagccgggtg
aaagtgctgcacgccaatatcagccgctgcggcgtgaagaacaccgcgctgacccacttc
gacggccgggtgttcggcgccgcgctgccggagagcttcgacgccattctgctcgatgcc
ccctgctccggcgaaggcgtggtacgcaaggatccggacgccatgagcaactggtcgccg
gaaagcgtgaccgaaatcgccgccacccaacgcgagctgatcgacagcgcgttccatgcg
ttggcgccaggcggcgtgatggtttactccacctgtaccctcaatgcgcaggaaaatcag
caggtggtgcgttggttgctggacacctacggcgacgcggtcagcgtcgaaccgctgggc
gagctgtttcccggcgctgacaaggcattgaccgccgaaggttttctgcacgtcttcccg
cagatttacgacagcgaagggtttttcgtcgcccgtctgcgcaaacagcacgccgtggca
ccgttgccgaaaccgacctataaagtcggtaagtttccgttcagcccactgtccggcaaa
gaggcgacgctggtcgcccaagccgccgccgcatccggcttaacctggggcgatgacagc
cggctgtgggagcgcgataaggaaatctggctgttcccggccgagctggagccgctgttc
ggcaaggtgcgcttctcgcgcatcggtctcaagctggcggagcgtttcccgaaaggtttc
cgttggcagcacgaagcggcgatcgccctcgcgggcgccggcggcaaacagcacttcgag
ctggacgccgcgctggcccaggagtggtatcacggccgcgatctctaccctgagcagcca
ccggcgggcgacgagtgcatcgtcacctatcaggggcaacctctgggtatcgccaaacgc
attggcagccgtatcaagaataacctgccgcgcgagctggtgcgggatggcgccctggat
ttccacctgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (11)   
   Pfam (11)   
All databases (19)   

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