KEGG   Serratia marcescens WW4: SMWW4_v1c22050
Entry
SMWW4_v1c22050    CDS       T02448                                 
Symbol
ydiJ
Name
(GenBank) putative FAD-linked oxidoreductase
  KO
K26063  (R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-]
Organism
smw  Serratia marcescens WW4
Pathway
smw00310  Lysine degradation
smw01100  Metabolic pathways
smw01120  Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:smw00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    SMWW4_v1c22050 (ydiJ)
SSDB
Motif
Pfam: FAD-oxidase_C FAD_binding_4 Fer4_8 BBE Fer4_20 Fer4_17 Fer4_18 Fer4_10
Other DBs
NCBI-ProteinID: AGE18006
Position
2385364..2388420
AA seq 1018 aa
MIPQISQAPGLVQRVLDFLEALKQNGFNGDTATSYADRLTMATDNSIYQLLPDAVVFPRS
TADVALIARLAGEERFNTLTFSPRGGGTGTNGQSLNTGIVVDMSRHMNRILEINVEQGWV
KVEAGVIKDQLNQYLRPFGYFFSPELSTSNRATLGGMINTDASGQGSLVYGKTSDHVLGL
RAVLLGGEMIDTRAMPTALAETIALEETAEGRIYRTVLNRCREQRALILEKFPKLNRFLT
GYDLRHVLSDDLQTFDLTRILTGAEGTLAFITEARLDITPLPKVRRLVNVKYDSFDSALR
NAPFMVEAKALSVETIDSKVLNLAREDIVWHSVNELIADVPDKEMLGLNIVEFAGDDRAL
IDGQMEALCQRLDELIAQRQGGVIGYQICGDLAGIERIYNMRKKAVGLLGNAKGRAKPIP
FAEDTCVPPQHLADYIVEFRQLLDDHNLSYGMFGHVDAGVLHVRPALDMCDPQQEVLMKQ
ISDRVVALTAKYGGLLWGEHGKGFRAEYSPEFFGETLYEELRRIKAAFDPDNRLNPGKIC
SPLAVDAPMMQVDAVKRGTFDRQIPVEVRTSFRGALECNGNGLCFNFDVRSPMCPSMKIS
GNRIHSPKGRATLVREWLRLLAEQGVDPLALEKQLPQQRLSLRGLIEKTRNSWHAGKGEY
DFSHEVKEAMSGCLACKACSTQCPIKIDVPGFRSRFLQLYHTRYLRPVSDYMVAGVESYT
PLMARAPKVFNFFFRQPWLREMSRNAIGMVDLPLLSSPTLRQQLSGHRATTLTLEQLEGL
SAEQRAEHVLIVQDPFTSYYDAKVVADFVRLVEKLGYKPVLLPFSPNGKAQHVKGFLTRF
ARTARKTADFLNRVAQLGMPLVGVDPALVLCYRDEYREILGAERGDFQVQLVHEWLQQRI
ADRAEQPATGEPWYLFGHCTETTALPASGQQWAAIFARFGAKLESVSVGCCGMAGTYGHE
ARNLQNSLGIYELSWHPTLQRLPRQRCLATGYSCRSQVKRIEGNGVRHPLQALLEMIE
NT seq 3057 nt   +upstreamnt  +downstreamnt
atgatcccacagatttctcaggcgcccggcctggttcaacgggtgctcgactttttggaa
gcactgaagcaaaacggattcaacggcgataccgccaccagctatgccgaccggctgacg
atggccaccgacaacagtatctatcagctgctgcccgatgcggtggtgttcccccgttcc
accgccgacgtggcgctgatcgcccgtctggccggagaagagcgcttcaatacgctgacc
ttcagcccgcgcggcggcggcaccggcaccaacggccagtcgctcaataccggcatcgtg
gtcgatatgtcgcgccatatgaaccgcattctggagatcaacgtcgaacagggctgggtg
aaagtcgaagccggggtgatcaaggaccagttgaatcaatacctgcgaccgttcggctac
ttcttctcgccggaactgtccaccagcaaccgcgccacgctggggggaatgatcaacacc
gatgcctccggccagggctcgctggtgtacggcaaaacctccgatcacgtgttggggctg
cgggcggtgctgctgggcggcgagatgatcgatacccgcgccatgccgacggcgctggcg
gaaacgattgctctggaagagaccgccgaagggcgcatctaccgcacggtgctcaaccgc
tgccgcgaacagcgcgcgctgatcctggagaaattccccaagctcaaccgcttcctcacc
ggttacgatctgcgccacgtgctgagcgacgatctgcaaaccttcgatttgacgcgtatt
ctgaccggcgccgagggcacgctggcgtttatcaccgaggcgcggctggacatcacgccg
ctgccgaaagtgcgccgcctggtcaacgtgaagtacgattccttcgactcggcgctgcgc
aatgcgccctttatggtcgaggccaaggcgctgtcggtggaaaccatcgattccaaggtg
ctgaacctggcgcgtgaagacatcgtttggcactcggtgaacgaactgatcgccgacgtg
ccggataaagagatgctcgggctgaacatcgtcgagttcgccggcgacgatcgggcgctg
atcgacggccagatggaggccctgtgccaacggctggacgaattgatcgcgcagcggcag
ggcggcgtgatcgggtaccagatctgcggcgatctggcgggcatcgagcgcatttacaac
atgcgcaagaaggcggtcgggctgctgggcaacgccaaagggcgcgccaagccgattccg
ttcgccgaggacacctgtgtgccgccgcaacatctggcggactatatcgtcgaatttcgg
caactgctcgatgaccacaatctgagctatggcatgtttggccacgtcgacgccggggtg
ctgcacgtgcgcccggcgctcgacatgtgtgacccgcagcaggaagtgctgatgaagcag
atctccgatcgggtggtggcgctgaccgccaaatacggcggcctgctgtggggggagcac
ggcaaggggttccgcgcggaatacagccctgaattcttcggggaaacgctgtatgaagag
ctgcgccgcatcaaggcggcgttcgatccggataaccgcctgaacccaggcaagatctgt
tcgccgctggcggtggatgcgccgatgatgcaggtggatgcggtcaaacgcggcaccttc
gatcgccagatcccggtcgaggtgcgcacctcgttccgcggcgcgctggagtgtaacggc
aacggcctgtgcttcaacttcgacgtgcgcagcccgatgtgcccgtcgatgaagatcagc
ggcaaccgcattcattcgccgaaagggcgggcgacgctggtgcgcgagtggctgcgtctg
ttggccgagcagggggtcgatccgctggcgctggagaaacagctgccgcagcagcgcctc
agcttgcgcggcctgatcgagaaaacccgcaacagctggcacgccggcaagggtgagtat
gacttctcgcacgaagtgaaagaggcgatgtccggctgcctggcctgtaaggcctgttca
acccagtgtcccatcaagattgacgtgccgggattccgttcgcgcttcctgcagctttac
cacactcgctatctgcgcccggtaagcgactacatggtcgccggcgtggagagctatacc
ccgttgatggcccgcgcgccgaaggtgttcaacttctttttccgccagccgtggctgcgg
gagatgagccgcaacgccatcggcatggtcgatctgccgctgttgtccagcccgacgctg
cgccagcagctgtccggccaccgcgcgaccacgctgacgctggagcagttggaagggctg
agcgccgagcagcgcgcagaacacgtgttgatcgtccaggatccgttcaccagctattac
gacgccaaagtggtggcggactttgttcggctggtggagaagcttggctataaaccggtg
ctgctgccgttctcaccgaacggcaaggcgcagcatgtgaagggcttcctgacgcggttc
gcccgcaccgcgcgcaaaaccgccgatttcctcaaccgtgtggcgcagctaggcatgccg
ctggtgggcgtcgatccggcgctggtgctgtgctaccgcgacgaataccgcgagatcctc
ggcgccgagcgcggcgatttccaggtgcagctggtgcatgaatggctgcagcagcggatc
gcggatcgtgccgaacagccggcgaccggcgagccgtggtatctgttcggccactgcacc
gaaaccaccgcgttgccggccagcggccaacagtgggcggcgatcttcgcccgcttcggc
gccaaactggagagcgtcagcgtcggttgctgcggcatggcgggcacttacggccatgaa
gccaggaacctgcaaaactcgctcggcatttatgagctatcatggcatccgacgctacag
cgtttgccgcggcagcgctgcctggcgaccggctattcctgccgcagccaggtgaaacgc
atcgagggcaatggcgtgcgccacccattacaggcacttctggagatgattgagtga

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (20)   

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