KEGG   Serratia marcescens WW4: SMWW4_v1c41920
Entry
SMWW4_v1c41920    CDS       T02448                                 
Symbol
parC
Name
(GenBank) DNA topoisomerase IV, subunit A
  KO
K02621  topoisomerase IV subunit A [EC:5.6.2.2]
Organism
smw  Serratia marcescens WW4
Brite
KEGG Orthology (KO) [BR:smw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:smw03032]
    SMWW4_v1c41920 (parC)
   03036 Chromosome and associated proteins [BR:smw03036]
    SMWW4_v1c41920 (parC)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:smw02048]
    SMWW4_v1c41920 (parC)
Enzymes [BR:smw01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     SMWW4_v1c41920 (parC)
DNA replication proteins [BR:smw03032]
 Prokaryotic type
  DNA Topoisomerases
   SMWW4_v1c41920 (parC)
Chromosome and associated proteins [BR:smw03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    SMWW4_v1c41920 (parC)
Prokaryotic defense system [BR:smw02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    SMWW4_v1c41920 (parC)
SSDB
Motif
Pfam: DNA_topoisoIV DNA_gyraseA_C DUF4890
Other DBs
NCBI-ProteinID: AGE19979
Position
complement(4543186..4545459)
AA seq 757 aa
MSDLTHDGVERLPLHTFTENAYLNYSMYVIMDRALPYIGDGLKPVQRRIIYAMSELGLTN
SAKFKKSARTVGDVLGKYHPHGDSACYEAMVLMAQPFSYRYPLVDGQGNWGAPDDPKSFA
AMRYTESRLSKYAEVLLAELGQGTVDWIPNFDGTLQEPKMLPARLPNILLNGTTGIAVGM
ATDIPPHNVREVAAAAVALLDKPGASLDDLLEFVQGPDFPTEAEIITPRDEIRKIYQSGR
GSVRMRAVWKKEDGSAVITALPHQVSGAKVLEQIASQMRAKKLPMVEDLRDESDHENPTR
LVIVPRSNRIDLEQVMNHLFATTDLERSYRINMNMIGLDNRPQVKGLVEILTEWLAYRRD
TVRRRLNYRLEKVLKRLHILEGLLVAFLNIDEVIHIIRSEDEPKPVLMQRFGISDTQAEA
ILELKLRHLAKLEEVKIRGEQDELAKERDQLQALLASERKLNTLIKKEIQADAQTYGDDR
RSPLTERAEAKAMSEHDFVPSEPVTIVLSEMGWVRSAKGHDIDPAGLSYKAGDSFRGAAR
GKSNQPVVFIDSTGRSYALDPMTLPSARGQGEPLTGKLTPPPGATIEQVLMAADDQKLLM
ASDAGYGFVCTFNDLVARNRAGKVMITLPDNARALPPMEIHGADDMLLSITAAGRMLMFP
VADLPQLSKGKGNKIVSIPAAQAAAGEDKLAWLFVLPPQASVTLHVGKRKLTLRPEDLQK
FRAERGRKGTQLPRGLQRIDRVEVDAPVRASGGDSEE
NT seq 2274 nt   +upstreamnt  +downstreamnt
atgagtgatctgactcatgacggtgtagagcgtttaccgctgcacacattcactgaaaac
gcctatctgaactattccatgtacgtcatcatggatcgggcgttgccgtacattggcgac
ggtttgaagccggtacaacgccgcatcatctacgccatgtctgagctggggctgaccaac
agcgccaaattcaagaaatccgcccgcaccgtgggcgacgtgctgggtaagtatcacccg
catggcgacagcgcgtgttatgaagccatggtgctgatggcgcagccgttctcgtatcgc
tatccgctggtggacggccaggggaactggggtgcgccggacgatcccaagtcgttcgcg
gcgatgcgttataccgaatcgcgcctgtccaaatacgccgaggtcttgctggccgaactg
ggccagggcacggtcgactggatcccgaactttgacggcacgctgcaagagccgaagatg
ctgccggcgcgtctgccgaacatcctgctgaacggcaccaccggcatcgcggtcggcatg
gcgaccgacattccgccgcacaacgtgcgcgaggtcgccgctgcggcagtggcgctgctc
gacaagccgggcgcctcgctcgatgacctgctcgagttcgtgcaggggccggacttcccg
accgaagccgagatcattaccccgcgcgatgaaattcgcaaaatttaccagagcggccgc
ggctcggtgcgcatgcgcgccgtgtggaagaaagaggacggcagcgcggtgatcaccgcc
ttgccgcatcaggtctccggcgccaaggtgctggagcagatcgccagccagatgcgcgcc
aagaagctgccgatggtcgaggatctgcgcgatgaatccgaccacgaaaatccgacgcgt
ctggtgatcgtgccgcgttccaaccgcatcgatctggagcaggtgatgaatcacctgttc
gccaccaccgatctggaacgcagctaccgcatcaacatgaacatgatcggtctggacaac
cgcccgcaggttaaagggctggtggagatcctcaccgaatggctggcctatcgtcgcgat
acggtgcgccgccgcctgaactaccgcctcgagaaggtgctcaagcgtttgcatatcctc
gaaggtttgctggtggcgttcctcaatatcgacgaggtgatccacatcatccgcagcgag
gatgagccgaagccggtgctgatgcagcgtttcggcatctccgatacccaggcggaagcg
atcctcgagctgaaactgcgtcacctggccaagctggaagaggtcaagatccgcggtgag
caggacgagctggcgaaagagcgcgatcaactgcaggcgctgctggcgtccgagcgcaag
ctgaatacgctgattaagaaagagatccaggccgacgcgcaaacctacggcgacgatcgc
cgttcgccgctgaccgagcgcgcggaagccaaggcgatgagcgagcacgacttcgtgccg
tccgagccggtgaccatcgtgctgtcggaaatgggctgggtgcgcagcgccaagggccac
gacatcgatccggcagggttgagctacaaggccggcgacagcttccgcggcgcggcgcgc
ggcaagagcaaccagccggtggtgtttatcgactctaccgggcgcagctatgcgctcgat
ccgatgacgctgccatcggcgcgcgggcagggcgagccgttgaccggcaagctgacgccg
ccgccgggcgccaccattgagcaggtgctgatggcggccgacgatcaaaaactgctgatg
gcctcagacgccggttacggtttcgtttgcaccttcaacgatctggtggcgcgcaaccgc
gccggcaaggtgatgatcacgctgccggacaacgccagagcgctgccgccgatggagatc
cacggcgcagacgatatgctgctgtcgatcaccgccgccgggcgcatgctgatgttcccg
gtcgccgatctgccgcagctgtcgaagggcaagggcaacaagatcgtctccattccggcg
gcgcaggccgccgccggtgaagacaagctggcctggctgttcgtgctgccgccgcaggcc
tccgtcacgctgcacgtcggcaaacgcaagctgacgctgcgtccggaagatctgcagaag
ttccgcgcggagcgcggccgtaagggcacccagctgccgcgcggcctgcagcgcatcgat
cgcgtcgaagtggatgcgccggtgcgggcgtcgggcggcgacagcgaagagtaa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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