KEGG   Sphingomonas melonis: BJP26_09815
Entry
BJP26_09815       CDS       T04509                                 
Name
(GenBank) choline dehydrogenase
  KO
K00108  choline dehydrogenase [EC:1.1.99.1]
Organism
smy  Sphingomonas melonis
Pathway
smy00260  Glycine, serine and threonine metabolism
smy01100  Metabolic pathways
Module
smy_M00555  Betaine biosynthesis, choline => betaine
Brite
KEGG Orthology (KO) [BR:smy00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    BJP26_09815
Enzymes [BR:smy01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.99  With unknown physiological acceptors
    1.1.99.1  choline dehydrogenase
     BJP26_09815
SSDB
Motif
Pfam: GMC_oxred_N GMC_oxred_C FAD_binding_2 NAD_binding_8 DAO Lycopene_cycl FAD_oxidored Pyr_redox_3 ApbA Pyr_redox_2 HI0933_like FAD_binding_3 GIDA TrkA_N
Other DBs
NCBI-ProteinID: AOW23842
Position
complement(2086579..2088237)
AA seq 552 aa
MTDSFDYIIVGAGSAGCVLAARLTEDGRHSVLVLEQGGSDRSVFIQMPSALSIPMNMARY
NWQYETEPEPHLGGRRLHTPRGKVIGGSSSINGMVYVRGNPADFDRWEGEGATGWGYRHV
LPYFRRAETRQEGGDAWRGDAGPLHTQYGQLANPLYRAFIDAAREAGYPETADINGYQQE
GFGRMDMTVHRGRRWSAASAYLKPAMRRPNLTVVPHALASRIVLDGRRATGIVYRRNGLE
TVVHARREVILAGGPINSPQLLKLSGIGPADELRAHGITPVHHLPGVGENLQDHLEFYFQ
IESKQPITLYPAMNPLRKALIGARWLFGKSGLGATNHFESCGFIRSRAGVAYPDIQYHFL
PLAVSYDGSALATGHGFQAHVGPMRSKSRGHVRLRSADPADKPSIRFNYMSHPDDWTEMR
ACVRLTREIFAQPAMAPYAGREIQPGTDVTDDAAIDAFVRTHVESAYHPSCSCAMGEASN
PMAVVDPMLRVHGIEGLRVVDSSVMPSITTGNLNAPTIMIGEKAADHILGRPTLSASNAE
YYRSKGWEARQR
NT seq 1659 nt   +upstreamnt  +downstreamnt
atgaccgacagcttcgattacatcatcgtcggcgccggatcggcggggtgcgtgctcgcc
gcccgattgaccgaggacggacggcatagcgtgctggtgctcgaacagggcgggtccgat
cgatcggtcttcatccagatgcccagcgcgctgtcgatcccgatgaacatggcgcgctac
aattggcaatatgagacggagccggagccgcatctgggcggtcgacggctgcacacgccg
cgcggcaaggtgatcggcggttcgtcttcgatcaatggcatggtctatgtgcgcggcaat
cccgccgatttcgatcggtgggaaggggaaggggcgaccggctggggctatcgccatgtg
ctgccctatttccggcgcgcggaaacgcggcaggaaggcggggacgcctggcgcggcgac
gccgggccgctccacacgcaatatggccaattggccaatccgctgtatcgcgccttcatc
gatgccgcgcgcgaagcgggctatcccgaaacggcggacatcaacggttaccagcaggaa
ggcttcggccggatggacatgaccgtccatcgcggacgccgctggagcgccgccagcgcg
tatctcaaaccggcgatgcgccgcccgaacctgaccgtggtgccccatgcgctggccagc
cgcatcgtcctcgacgggcggcgggcgacggggatcgtctatcgccgcaacggcttggag
acggtcgtccacgcccggcgcgaggtgatcctggcaggcgggccgatcaattcgccgcaa
ttgctgaagctgtcggggatcggcccggccgacgaattgcgcgcgcatggcattacgccg
gtccatcatcttcccggcgtgggcgagaatttgcaggaccatctggaattctatttccag
atcgaatccaagcaaccgatcaccctctatccggcgatgaatccgctgcgaaaagcgctg
atcggcgcgcgctggctgttcgggaaaagcggattgggcgcgaccaaccatttcgaaagc
tgcggcttcatccgcagccgtgccggggtcgcctatccggacatccaatatcacttcctg
ccgctggcggtcagctacgacggatcggcgctcgcgaccggccacggcttccaggcgcat
gtcgggccgatgcgatcgaagagccgcggccatgtccgcctgcgcagcgccgatccggcg
gacaagccgtcgatccgcttcaactatatgagccatccggacgattggaccgagatgcgc
gcatgcgtgcgcctgacgcgcgagatcttcgcccagccggcgatggcgccctacgccggg
cgcgagatccagcccggaacggacgtcaccgacgacgcggcgatcgacgccttcgtccgc
acgcacgtcgaaagcgcctatcatccgtcctgctcctgcgcgatgggcgaggcgtcgaac
ccgatggcggtggtcgatcccatgctgcgggtgcatggcatcgagggcctgcgcgtcgtc
gattcctcggtgatgccgtcgatcacgaccgggaacctcaacgcaccgacgatcatgatc
ggcgagaaggcggccgatcacatcctgggtcgcccgacgctgtccgcctcgaatgcggaa
tattaccgctccaaggggtgggaagcgcggcagcgctag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (14)   
   Pfam (14)   
All databases (29)   

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