KEGG   Stenotrophomonas maltophilia D457: SMD_2202
Entry
SMD_2202          CDS       T02061                                 
Name
(GenBank) endonuclease
  KO
K05522  endonuclease VIII [EC:3.2.2.- 4.2.99.18]
Organism
smz  Stenotrophomonas maltophilia D457
Pathway
smz03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:smz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    SMD_2202
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:smz03400]
    SMD_2202
Enzymes [BR:smz01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     SMD_2202
DNA repair and recombination proteins [BR:smz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     SMD_2202
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH
Other DBs
NCBI-ProteinID: CCH12743
Position
complement(2457375..2458109)
AA seq 244 aa
MPEGPSIVLLREASSRFKGHVVRGVSGNRRIDLSPLQGRRVKAVRSWGKHFLLEFSHHTL
RIHLMMFGSWRIDERKPAPARVSLAFDNGELNFYACSVRLIDQPLDDVYDWRADVMNDAW
DPKLARRKLKALPDTLVCDALLDQTIFAGVGNIIKNEVLFRIRVHPATRLGDLPPRKLTA
LINQARAYSFDFLEWKRRFELKKHWQVHTRKVCPLCGGPISKLYMGTTRRRTFFCQKDQV
LYPP
NT seq 735 nt   +upstreamnt  +downstreamnt
atgcctgagggcccgtccattgtcctgctgcgcgaagcctccagccgcttcaagggtcac
gtcgtgcgcggcgtctccggcaacaggcgcatcgacctgtcaccgctgcagggacgcagg
gtcaaggcggttcgcagctggggcaagcacttcctgctggagttcagccaccacacgctg
cgcatccatctgatgatgttcggcagctggcgcatcgacgaacggaagccagctcctgca
cgggtgtcgctggcattcgacaacggggaactgaatttctacgcgtgttccgtccgactg
atcgaccagccgttggacgacgtctacgactggcgggcggacgtgatgaacgacgcctgg
gatccaaaactggcccggcgcaagctgaaggcactgccggacaccctggtctgtgatgcg
cttctggaccagacgatcttcgcgggcgtcggcaatatcatcaagaatgaggtgctgttc
cgcatccgcgtgcatccggccacgcgactgggcgacctgccaccgcgcaagctcaccgcc
ctgatcaaccaggcccgtgcctacagcttcgacttcctggaatggaaacggcgcttcgaa
ttgaagaagcactggcaggtgcatacgcgaaaggtgtgcccgctctgcggtggccccatc
agcaagctgtacatgggtacgacgcggcgacgcacgttcttctgccaaaaggatcaggtg
ctctacccaccctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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