KEGG   Stackebrandtia nassauensis: Snas_1400Help
Entry
Snas_1400         CDS       T01194                                 

Definition
DNA-formamidopyrimidine glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
sna  Stackebrandtia nassauensis
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:sna00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Snas_1400
Enzymes [BR:sna01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Snas_1400
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Snas_1400
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(1483938..1484798)
Genome map
AA seq 286 aa AA seqDB search
MPELPEVEALADFLRRRAVSHEVKRVDVASITALKTFDPPPTALHGRRITAVDRHGKFLD
LDADGTHLIFHLARAGWLRWNDKLAATPLRPGKHPLALRLALDDGSGFDLSEAGTKKRLA
VYVVSDPAQVPGIAGLGPDPLAESFTEAAFAAVLSGRRTQIKGLLRDQKLIAGIGNAYSD
EILHAARMSPFKLADSLTDTDVSVLYEAMVDTLRTAVAASSGSAAKDLKAHKHDSLRVHG
RAGQPCPVCGDTIAEVSFADSALQYCPTCQTGGRKLADRRMSRLLK
NT seq 861 nt NT seq  +upstreamnt  +downstreamnt
atgccggagctacccgaggtggaggcgctcgcggacttcctgcgccgccgggcggtgtcg
cacgaggtcaaacgcgtcgacgtcgcctcgatcaccgcgctgaagaccttcgacccgccc
ccgacggcgctgcacggccgccggatcaccgccgtggaccggcacggcaagttcctcgac
ctggacgccgacggcacccacctgatcttccacctggcccgcgccggttggctgcgctgg
aacgacaagctcgcggccacgccgctgcggcccggcaaacacccgctggcgctgcggctg
gccctcgacgacggttccgggttcgacctgtccgaggccggaacgaagaaacggctggcc
gtgtacgtcgtgtccgaccccgcgcaggtccccggcatcgccggtctcgggcccgatccg
ctggccgagtcgttcaccgaggcggcgttcgcggcggtgctgtcgggccgccgcacccag
atcaagggcctgctgcgggaccagaaactgatcgcgggcatcggcaacgcctactccgac
gagatcctgcacgccgcccggatgtcgccgttcaagctcgccgactcgctcaccgacacc
gacgtgtccgtcctctatgaagcgatggtcgacacgctgcggaccgcggtggcggcgtcg
tcgggttcggcggccaaggatctcaaggcgcacaagcacgacagcctgcgcgtccacggc
cgcgccgggcagccgtgcccggtgtgcggcgacaccatcgccgaggtctcgttcgccgac
tcggcgctgcagtactgcccgacctgccagaccggcggcaggaaactcgccgaccgtcgg
atgtcgcggctgctgaagtag

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