KEGG   Stackebrandtia nassauensis: Snas_4167
Entry
Snas_4167         CDS       T01194                                 
Name
(GenBank) RNA modification enzyme, MiaB family
  KO
K06168  tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
Organism
sna  Stackebrandtia nassauensis
Brite
KEGG Orthology (KO) [BR:sna00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sna03016]
    Snas_4167
Enzymes [BR:sna01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.3  tRNA-2-methylthio-N6-dimethylallyladenosine synthase
     Snas_4167
Transfer RNA biogenesis [BR:sna03016]
 Prokaryotic type
  tRNA modification factors
   Methylthiotransferases
    Snas_4167
SSDB
Motif
Pfam: Radical_SAM UPF0004 TRAM TRAM_2
Other DBs
NCBI-ProteinID: ADD43818
UniProt: D3Q285
Position
complement(4462927..4464414)
AA seq 495 aa
MTEVPTARSYAVKTYGCQMNVHDSERIGGLLEDAGYVPAADTGEADVVVFNTCAVRENAD
NRLYGNLGHLRPQKVAKPGMQIAVGGCLAQKDRGDIVKKAPWVDVVFGTHNIGSLPVLLE
RARHNARAEVEILEALEVFPSTLPTKRESTYAGWVSISVGCNNTCTFCIVPSLRGKEKDR
RPGEILAEVRALVDEGVSEVTLLGQNVNSYGVEFGDKLAFGKLLRACGEIDGLERVRFTS
PHPKDFTDDVIDAMAETPNVCHQLHMPLQSGSDTVLKGMRRSYRREKYLGIIDKVRAAMP
DAAITTDIIVGFPGETEADFEDTLDVVRKARFSGAFTFQYSIRPGTPAATMDGQVPKHVV
QERYERLIAVQEEISWDENKKQIGREVEVLVAVGEGRKDAATGRMSGRARDGRLVHFDAT
GFDVRPGDVVTTTITAAAPHHLIADDLLTEHRHTRAGDAWEAGNTPKLPGVSLGMPGLGA
PRPAAQEQDACCGGH
NT seq 1488 nt   +upstreamnt  +downstreamnt
gtgactgaagtacctactgccaggtcttatgccgtcaagacctacggctgccagatgaac
gtccacgactccgaacgcatcggcggcctgctggaggacgcgggctacgtccccgccgcc
gacaccggcgaggccgacgtggtcgtgttcaacacctgcgcggtgcgggagaacgcagac
aaccggctgtacggcaacctcggtcacctgcgcccccagaaggtcgccaaacccggcatg
cagatcgccgtgggcggctgcctggcccaaaaggaccgcggcgacatcgtcaagaaggcg
ccctgggtcgacgtcgtgttcggcacccacaacatcggctcgctgccggtgctgctggaa
cgcgcccgccacaacgcccgcgccgaggtggagatcctggaagccctggaggtgttcccg
tccactctgcccaccaaacgggagtcgacctacgcgggctgggtgtcgatctcggtgggc
tgcaacaacacctgcacgttctgtatcgtgccgtcgctgcgcggcaaggagaaggaccgc
cgccccggcgagatcctggccgaggtccgcgccctcgtcgacgagggcgtgtccgaagtg
acactgctgggccagaacgtcaactcctacggcgtcgagttcggcgacaaactcgccttc
ggcaaactgctgcgcgcctgcggcgagatcgacggcctggagcgggtccggttcaccagc
ccgcaccccaaggacttcaccgacgacgtcatcgacgcgatggccgagacccccaacgtg
tgccaccagctgcacatgccgttgcagtccggctcggacacggtcctgaagggaatgcgc
cgctcctaccggcgcgagaagtacctgggcatcatcgacaaggtgcgcgcggccatgccc
gacgcggccatcaccaccgacatcatcgtcggcttccccggcgagaccgaggccgacttc
gaggacacactggacgtcgtgcgcaaggcccggttctccggtgccttcacgttccagtac
tcgatccggcccggcaccccggcggccaccatggacggtcaggtccccaaacacgtggtc
caggaacgctacgagcggctgatcgcggtacaggaggagatctcctgggacgagaacaag
aagcagatcggccgcgaggtcgaggtgctggtcgccgtcggtgagggccgcaaggacgcc
gccaccggccggatgtccggccgggcccgcgacggccgcctggtccacttcgacgccacc
ggtttcgacgtccgccccggcgacgtcgtcaccaccaccatcaccgccgccgccccgcac
cacctcatcgccgacgacctgctgaccgagcaccgccacacccgggccggagacgcctgg
gaagccgggaacacccccaaactgcccggagtgtcgctgggcatgcccggtctgggcgcg
ccccggcccgccgcccaggagcaggacgcctgctgcggcggacactga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (32)   

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