KEGG   Stackebrandtia nassauensis: Snas_5289Help
Entry
Snas_5289         CDS       T01194                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
sna  Stackebrandtia nassauensis
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:sna00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Snas_5289
Enzymes [BR:sna01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Snas_5289
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Snas_5289
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(5617342..5618184)
Genome map
AA seq 280 aa AA seqDB search
MPELPEVETIRRGLDGWVIGRRITDVEVRHPRAVRRHHAGPADFRARLLGTTITGTRRRG
KFLWLPLDSGDALLCHLGMSGQLLIEPPDKPDGPHLRIRLVFDQAEHQLRFVDQRTFGEM
LVSPDGAELPGEIAHIAPDIYDPAFDLAEFSRRLRARRGEVKRALLDQSLISGVGNIYAD
EALWRARLHGNHPSQELSDAVARELVEHIREVFDAALNAGGTSFDALYVNTNGESGYFDR
SLAVYGRAEEPCRRCGTPVERIKFTNRSSFHCPSCQIVPG
NT seq 843 nt NT seq  +upstreamnt  +downstreamnt
atgcccgaactgcccgaggtggagacgatccggcgcggcctggacggctgggtcatcggc
cgtcgtatcaccgacgtcgaggtgcggcatccgcgtgccgtgcggcggcatcacgccgga
cccgccgatttccgtgcccggctgttggggacgacgatcacggggactcgcaggcggggc
aagttcctctggctccccttggattccggggacgcgttgttgtgccacctcggcatgtcg
ggccagctgctgatcgaaccgcccgacaaacccgacggcccgcacctgcgcatccgcctg
gtcttcgaccaggccgagcaccagctgcggtttgtcgaccagcgcaccttcggcgagatg
ctggtcagccccgacggggccgagctgccgggggagatcgcccatatcgcgcccgacatc
tacgatcccgctttcgatctggcggagttctcgcgcaggttgcgggctcggcgcggcgag
gtgaagcgggcgctgctggaccagtcgctgatttccggggtgggcaacatctacgccgac
gaggcgctgtggcgggcccggctacacggcaatcatccctcgcaggaattgtcggacgcg
gtggcgcgggagcttgtcgagcacatccgggaggtgttcgacgcggcgttgaacgcgggc
ggcacgtcctttgacgcgttgtacgtcaacacgaacggggaatcggggtatttcgatcgc
tcgctggcggtgtacgggcgggccgaggagccgtgtcggcgttgtgggacgccggtggag
cggatcaagttcacgaaccggtcgtcgttccactgtccttcctgtcagatcgttcccgga
tag

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