KEGG T01559: SNE

Simkania negevensis: SNE_A23610

Entry

SNE_A23610 CDS T01559

Gene name

recD1

Definition

exodeoxyribonuclease V subunit alpha (EC:3.1.11.5)

Orthology

K03581

exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]

Organism

sng Simkania negevensis

Pathway

sng03440

Homologous recombination

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:sng03440]

SSDB

Motif

Pfam:

AAA_30 AAA_11 AAA_19 UvrD_C_2 Viral_helicase1 Helicase_RecD UvrD-helicase AAA_22 PIF1 TrwB_AAD_bind AAA_16 AAA_25 IstB_IS21 DEAD AAA_28 AAA_10 Flavi_DEAD ArgK T2SE DUF853 MR_MLE

Other DBs

NCBI-GI:

338734256

NCBI-GeneID:

10888510

UniProt:

F8L669

Position

gsn.131:complement(2463825..2465249)

AA seq 474 aa
MLGWGKFFGVSILNDEIVIDQLVADNVGIPEAAEMMEAVRQGHLCVQKVIPTARELHGDE
EWFEEPIGQWGDLAYFQRCWVMESRVVRELKRLIMDVKPIDMMGMGSLNEGQKEAVSKGL
RASVFCLSGGPGTGKTHTVAELVGQFCDAGGKVLVAAPTGKAVAELMRRLGDVKGGTLHR
LLGVRSVSDILWGKKKLDAGMVVVDECSMIDVGMWGALFSTIREGTRLILVGDHDQLPPV
EAGTVYGEICGWMKECHPECYAHLDECMRSDQVEILEKAACVKVGKAIEAKSLKGLDVRE
WKKRFKQGGFRILSCLREGPYGVEAINRELFEAFRKEYQGGEWRIPVMVTRTSYDYEVCN
GEMGEWVKQTGSVELEAEDVVEFGDKVIPAVLLPGLELAYAISVHKSQGSEYDHVALLVP
PGSEIFGREILYTGITRARLSLEIYGEAETIELCVAQSAQKLSGIRRKLECLDV

NT seq 1425 nt +upstreamnt +downstreamnt
gtgttaggatggggcaaattttttggagtgtcgattttgaatgacgagattgtcatagat
caacttgtggcagacaatgttggtattcctgaagctgctgaaatgatggaagctgtaagg
caaggccatctgtgcgtgcaaaaagtgattcctactgcgcgtgaacttcatggggatgaa
gagtggtttgaagaaccgatcggtcagtggggtgatttagcttattttcaacggtgttgg
gtcatggaatcgcgtgttgtgcgtgaactgaagcgccttatcatggatgtcaagccgatt
gacatgatggggatgggttcattgaatgaagggcagaaagaagcagttagtaaagggctt
cgcgcgagtgtcttttgtttatcgggtgggcctggaacaggaaagacgcatacggttgcc
gaacttgtggggcaattttgtgatgcaggtggaaaggtacttgtggcggcccctacaggt
aaagcagttgcggagttgatgcgcaggttaggagatgtaaagggggggacgttgcaccgg
ttgctcggagtccggagtgtgagcgatattttgtggggaaagaagaagttagatgcgggg
atggttgttgtggatgagtgttcgatgattgatgtaggaatgtggggagctcttttcagc
acaattcgggaaggaacccgtttgattcttgtgggagatcatgatcagttgcctcctgtt
gaggcggggacggtctatggagaaatctgtggctggatgaaggagtgtcatcctgagtgt
tatgctcatttggatgaatgtatgcggagtgatcaggtggagattttggaaaaggccgcg
tgtgtaaaagtggggaaagcaatcgaggcgaaaagtttgaagggactagatgtgcgagag
tggaaaaagcggtttaaacagggtggttttcggattttgtcgtgtttgcgtgaaggaccc
tacggagtagaggcaatcaatcgggaactttttgaagcttttcgcaaagagtatcagggg
ggagagtggcgcattcctgtcatggtaacacggacgagttatgactatgaagtttgtaat
ggagaaatgggtgagtgggtgaaacagactggatcagtagagcttgaagcagaagatgtg
gtcgagtttggagataaggtgattccagctgtcttattgccgggacttgagttggcatat
gcaatatcagtgcacaagagtcagggaagtgaatatgatcatgtggcactgctggttccg
ccgggatctgaaatttttggcagagaaatcctctatactggtataactagagcccgtttg
tctctcgaaatttacggcgaggcagaaacaatagaactttgtgtggcgcagtcggcccaa
aagttgtctggaatcaggagaaagttggaatgtttagacgtgtaa

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (21)   
   Pfam (21)   
All databases (30)   

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